Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc58Q8R3Q6 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc58Q8R3Q6 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc58Q8R3Q6 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc58Q8R3Q6 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ccdc58Q8R3Q6 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.03□□□□□ -0.16
Ccdc58Q8R3Q6 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc58Q8R3Q6 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc58Q8R3Q6 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc58Q8R3Q6 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc58Q8R3Q6 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Ccdc58Q8R3Q6 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Ccdc58Q8R3Q6 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Ccdc58Q8R3Q6 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc58Q8R3Q6 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc58Q8R3Q6 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc58Q8R3Q6 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Ccdc58Q8R3Q6 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc58Q8R3Q6 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Ccdc58Q8R3Q6 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.02□□□□□ -0.16
Ccdc58Q8R3Q6 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.02□□□□□ -0.17
Ccdc58Q8R3Q6 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc58Q8R3Q6 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.02□□□□□ -0.17
Ccdc58Q8R3Q6 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc58Q8R3Q6 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.02□□□□□ -0.17
Ccdc58Q8R3Q6 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ccdc58Q8R3Q6 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc58Q8R3Q6 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc58Q8R3Q6 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc58Q8R3Q6 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.02□□□□□ -0.17
Ccdc58Q8R3Q6 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc58Q8R3Q6 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc58Q8R3Q6 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc58Q8R3Q6 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc58Q8R3Q6 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc58Q8R3Q6 App-207ENSMUST00000227737 2827 ntBASIC14.01□□□□□ -0.17
Ccdc58Q8R3Q6 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc58Q8R3Q6 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc58Q8R3Q6 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc58Q8R3Q6 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc58Q8R3Q6 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc58Q8R3Q6 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc58Q8R3Q6 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc58Q8R3Q6 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc58Q8R3Q6 Gm11336-201ENSMUST00000118168 334 ntBASIC14.01□□□□□ -0.17
Ccdc58Q8R3Q6 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.01□□□□□ -0.17
Ccdc58Q8R3Q6 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.01□□□□□ -0.17
Ccdc58Q8R3Q6 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc58Q8R3Q6 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ccdc58Q8R3Q6 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ccdc58Q8R3Q6 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc58Q8R3Q6 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc58Q8R3Q6 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc58Q8R3Q6 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc58Q8R3Q6 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc58Q8R3Q6 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc58Q8R3Q6 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc58Q8R3Q6 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc58Q8R3Q6 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc58Q8R3Q6 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc58Q8R3Q6 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc58Q8R3Q6 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc58Q8R3Q6 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc58Q8R3Q6 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc58Q8R3Q6 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc58Q8R3Q6 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc58Q8R3Q6 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc58Q8R3Q6 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc58Q8R3Q6 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ccdc58Q8R3Q6 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc58Q8R3Q6 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc58Q8R3Q6 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc58Q8R3Q6 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Ccdc58Q8R3Q6 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc58Q8R3Q6 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc58Q8R3Q6 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc58Q8R3Q6 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc58Q8R3Q6 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc58Q8R3Q6 Gm4217-201ENSMUST00000182243 1002 ntBASIC14□□□□□ -0.17
Ccdc58Q8R3Q6 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc58Q8R3Q6 Gm7370-201ENSMUST00000219471 767 ntBASIC14□□□□□ -0.17
Ccdc58Q8R3Q6 Slc35b2-207ENSMUST00000226086 850 ntBASIC14□□□□□ -0.17
Ccdc58Q8R3Q6 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc58Q8R3Q6 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc58Q8R3Q6 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc58Q8R3Q6 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc58Q8R3Q6 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14□□□□□ -0.17
Ccdc58Q8R3Q6 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc58Q8R3Q6 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc58Q8R3Q6 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ccdc58Q8R3Q6 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc58Q8R3Q6 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc58Q8R3Q6 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc58Q8R3Q6 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Ccdc58Q8R3Q6 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc58Q8R3Q6 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ccdc58Q8R3Q6 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14□□□□□ -0.17
Ccdc58Q8R3Q6 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc58Q8R3Q6 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc58Q8R3Q6 Gm15442-201ENSMUST00000117905 1527 ntBASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms