Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Zcchc9Q8R1J3 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Zcchc9Q8R1J3 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Zcchc9Q8R1J3 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Zcchc9Q8R1J3 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
Zcchc9Q8R1J3 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Zcchc9Q8R1J3 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Zcchc9Q8R1J3 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Zcchc9Q8R1J3 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.55■□□□□ 0.08
Zcchc9Q8R1J3 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Zcchc9Q8R1J3 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Zcchc9Q8R1J3 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Zcchc9Q8R1J3 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Zcchc9Q8R1J3 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Zcchc9Q8R1J3 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Zcchc9Q8R1J3 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Zcchc9Q8R1J3 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Zcchc9Q8R1J3 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Zcchc9Q8R1J3 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Zcchc9Q8R1J3 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Zcchc9Q8R1J3 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.55■□□□□ 0.08
Zcchc9Q8R1J3 Gm27646-201ENSMUST00000183989 110 ntBASIC15.55■□□□□ 0.08
Zcchc9Q8R1J3 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Zcchc9Q8R1J3 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.55■□□□□ 0.08
Zcchc9Q8R1J3 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Zcchc9Q8R1J3 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.55■□□□□ 0.08
Zcchc9Q8R1J3 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Zcchc9Q8R1J3 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.55■□□□□ 0.08
Zcchc9Q8R1J3 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Zcchc9Q8R1J3 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Zcchc9Q8R1J3 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Zcchc9Q8R1J3 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Zcchc9Q8R1J3 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Zcchc9Q8R1J3 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Zcchc9Q8R1J3 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Zcchc9Q8R1J3 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Zcchc9Q8R1J3 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Zcchc9Q8R1J3 Mir6404-201ENSMUST00000183699 94 ntBASIC15.54■□□□□ 0.08
Zcchc9Q8R1J3 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.54■□□□□ 0.08
Zcchc9Q8R1J3 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.54■□□□□ 0.08
Zcchc9Q8R1J3 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Zcchc9Q8R1J3 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Zcchc9Q8R1J3 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Zcchc9Q8R1J3 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Zcchc9Q8R1J3 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Zcchc9Q8R1J3 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Zcchc9Q8R1J3 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Zcchc9Q8R1J3 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Zcchc9Q8R1J3 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Zcchc9Q8R1J3 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Zcchc9Q8R1J3 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Zcchc9Q8R1J3 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Zcchc9Q8R1J3 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Zcchc9Q8R1J3 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Zcchc9Q8R1J3 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Zcchc9Q8R1J3 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Zcchc9Q8R1J3 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Zcchc9Q8R1J3 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.53■□□□□ 0.08
Zcchc9Q8R1J3 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Zcchc9Q8R1J3 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Zcchc9Q8R1J3 Gm25911-201ENSMUST00000157621 56 ntBASIC15.53■□□□□ 0.08
Zcchc9Q8R1J3 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.53■□□□□ 0.08
Zcchc9Q8R1J3 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Zcchc9Q8R1J3 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.53■□□□□ 0.08
Zcchc9Q8R1J3 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Zcchc9Q8R1J3 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Zcchc9Q8R1J3 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Zcchc9Q8R1J3 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Zcchc9Q8R1J3 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Zcchc9Q8R1J3 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Zcchc9Q8R1J3 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Zcchc9Q8R1J3 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Zcchc9Q8R1J3 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Zcchc9Q8R1J3 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
Zcchc9Q8R1J3 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Zcchc9Q8R1J3 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Zcchc9Q8R1J3 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Zcchc9Q8R1J3 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.53■□□□□ 0.08
Zcchc9Q8R1J3 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Zcchc9Q8R1J3 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Zcchc9Q8R1J3 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Zcchc9Q8R1J3 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Zcchc9Q8R1J3 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
Zcchc9Q8R1J3 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Zcchc9Q8R1J3 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Zcchc9Q8R1J3 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Zcchc9Q8R1J3 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Zcchc9Q8R1J3 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Zcchc9Q8R1J3 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.52■□□□□ 0.08
Zcchc9Q8R1J3 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Zcchc9Q8R1J3 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.52■□□□□ 0.08
Zcchc9Q8R1J3 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Zcchc9Q8R1J3 Mir3113-201ENSMUST00000175478 76 ntBASIC15.52■□□□□ 0.08
Zcchc9Q8R1J3 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.52■□□□□ 0.08
Zcchc9Q8R1J3 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.52■□□□□ 0.08
Zcchc9Q8R1J3 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Zcchc9Q8R1J3 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Zcchc9Q8R1J3 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Zcchc9Q8R1J3 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Zcchc9Q8R1J3 Gm10175-201ENSMUST00000086013 645 ntBASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms