Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atf7Q8R0S1 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atf7Q8R0S1 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atf7Q8R0S1 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Atf7Q8R0S1 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Atf7Q8R0S1 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atf7Q8R0S1 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atf7Q8R0S1 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Atf7Q8R0S1 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atf7Q8R0S1 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC18.41■□□□□ 0.54
Atf7Q8R0S1 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
Atf7Q8R0S1 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atf7Q8R0S1 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atf7Q8R0S1 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atf7Q8R0S1 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atf7Q8R0S1 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Atf7Q8R0S1 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.41■□□□□ 0.54
Atf7Q8R0S1 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.41■□□□□ 0.54
Atf7Q8R0S1 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atf7Q8R0S1 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Atf7Q8R0S1 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atf7Q8R0S1 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atf7Q8R0S1 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atf7Q8R0S1 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Atf7Q8R0S1 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Atf7Q8R0S1 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atf7Q8R0S1 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atf7Q8R0S1 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atf7Q8R0S1 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atf7Q8R0S1 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atf7Q8R0S1 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.4■□□□□ 0.54
Atf7Q8R0S1 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atf7Q8R0S1 Gm14722-201ENSMUST00000118943 689 ntBASIC18.4■□□□□ 0.54
Atf7Q8R0S1 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Atf7Q8R0S1 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Atf7Q8R0S1 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.4■□□□□ 0.54
Atf7Q8R0S1 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.4■□□□□ 0.54
Atf7Q8R0S1 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
Atf7Q8R0S1 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Atf7Q8R0S1 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atf7Q8R0S1 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atf7Q8R0S1 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Atf7Q8R0S1 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atf7Q8R0S1 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Atf7Q8R0S1 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atf7Q8R0S1 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atf7Q8R0S1 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Atf7Q8R0S1 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.39■□□□□ 0.54
Atf7Q8R0S1 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.54
Atf7Q8R0S1 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.39■□□□□ 0.54
Atf7Q8R0S1 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Atf7Q8R0S1 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atf7Q8R0S1 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC18.39■□□□□ 0.53
Atf7Q8R0S1 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atf7Q8R0S1 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
Atf7Q8R0S1 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Atf7Q8R0S1 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atf7Q8R0S1 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Atf7Q8R0S1 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.39■□□□□ 0.53
Atf7Q8R0S1 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.39■□□□□ 0.53
Atf7Q8R0S1 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Atf7Q8R0S1 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.39■□□□□ 0.53
Atf7Q8R0S1 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atf7Q8R0S1 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atf7Q8R0S1 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atf7Q8R0S1 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atf7Q8R0S1 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atf7Q8R0S1 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atf7Q8R0S1 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atf7Q8R0S1 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Atf7Q8R0S1 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atf7Q8R0S1 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Atf7Q8R0S1 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Atf7Q8R0S1 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC18.38■□□□□ 0.53
Atf7Q8R0S1 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atf7Q8R0S1 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atf7Q8R0S1 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atf7Q8R0S1 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.38■□□□□ 0.53
Atf7Q8R0S1 Gm9103-201ENSMUST00000119371 405 ntBASIC18.38■□□□□ 0.53
Atf7Q8R0S1 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.38■□□□□ 0.53
Atf7Q8R0S1 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.38■□□□□ 0.53
Atf7Q8R0S1 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Atf7Q8R0S1 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Atf7Q8R0S1 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Atf7Q8R0S1 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Atf7Q8R0S1 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atf7Q8R0S1 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Atf7Q8R0S1 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atf7Q8R0S1 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atf7Q8R0S1 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atf7Q8R0S1 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Atf7Q8R0S1 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Atf7Q8R0S1 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atf7Q8R0S1 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Atf7Q8R0S1 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atf7Q8R0S1 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atf7Q8R0S1 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atf7Q8R0S1 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atf7Q8R0S1 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atf7Q8R0S1 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms