Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC19.09■□□□□ 0.65
Sf3a1Q8K4Z5 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sf3a1Q8K4Z5 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sf3a1Q8K4Z5 Gm25990-201ENSMUST00000102440 86 ntBASIC19.09■□□□□ 0.65
Sf3a1Q8K4Z5 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Sf3a1Q8K4Z5 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC19.09■□□□□ 0.65
Sf3a1Q8K4Z5 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sf3a1Q8K4Z5 Gm8344-201ENSMUST00000119813 856 ntBASIC19.09■□□□□ 0.65
Sf3a1Q8K4Z5 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sf3a1Q8K4Z5 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Sf3a1Q8K4Z5 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC19.09■□□□□ 0.65
Sf3a1Q8K4Z5 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC19.09■□□□□ 0.65
Sf3a1Q8K4Z5 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sf3a1Q8K4Z5 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sf3a1Q8K4Z5 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sf3a1Q8K4Z5 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sf3a1Q8K4Z5 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sf3a1Q8K4Z5 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sf3a1Q8K4Z5 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sf3a1Q8K4Z5 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sf3a1Q8K4Z5 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sf3a1Q8K4Z5 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sf3a1Q8K4Z5 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC19.08■□□□□ 0.64
Sf3a1Q8K4Z5 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Sf3a1Q8K4Z5 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
Sf3a1Q8K4Z5 Gm19164-201ENSMUST00000210667 640 ntBASIC19.08■□□□□ 0.64
Sf3a1Q8K4Z5 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sf3a1Q8K4Z5 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sf3a1Q8K4Z5 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sf3a1Q8K4Z5 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sf3a1Q8K4Z5 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Sf3a1Q8K4Z5 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sf3a1Q8K4Z5 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sf3a1Q8K4Z5 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC19.07■□□□□ 0.64
Sf3a1Q8K4Z5 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sf3a1Q8K4Z5 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sf3a1Q8K4Z5 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC19.07■□□□□ 0.64
Sf3a1Q8K4Z5 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC19.07■□□□□ 0.64
Sf3a1Q8K4Z5 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sf3a1Q8K4Z5 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sf3a1Q8K4Z5 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sf3a1Q8K4Z5 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Sf3a1Q8K4Z5 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sf3a1Q8K4Z5 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sf3a1Q8K4Z5 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sf3a1Q8K4Z5 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sf3a1Q8K4Z5 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sf3a1Q8K4Z5 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Sf3a1Q8K4Z5 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sf3a1Q8K4Z5 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sf3a1Q8K4Z5 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sf3a1Q8K4Z5 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sf3a1Q8K4Z5 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sf3a1Q8K4Z5 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Sf3a1Q8K4Z5 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
Sf3a1Q8K4Z5 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sf3a1Q8K4Z5 Gm6089-201ENSMUST00000197666 938 ntBASIC19.06■□□□□ 0.64
Sf3a1Q8K4Z5 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC19.06■□□□□ 0.64
Sf3a1Q8K4Z5 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sf3a1Q8K4Z5 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sf3a1Q8K4Z5 Gm7669-201ENSMUST00000210184 1603 ntBASIC19.06■□□□□ 0.64
Sf3a1Q8K4Z5 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sf3a1Q8K4Z5 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sf3a1Q8K4Z5 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sf3a1Q8K4Z5 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sf3a1Q8K4Z5 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sf3a1Q8K4Z5 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sf3a1Q8K4Z5 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sf3a1Q8K4Z5 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
Sf3a1Q8K4Z5 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Sf3a1Q8K4Z5 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sf3a1Q8K4Z5 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
Sf3a1Q8K4Z5 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC19.05■□□□□ 0.64
Sf3a1Q8K4Z5 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Sf3a1Q8K4Z5 Gm27646-201ENSMUST00000183989 110 ntBASIC19.05■□□□□ 0.64
Sf3a1Q8K4Z5 AC161829.1-201ENSMUST00000220298 281 ntBASIC19.05■□□□□ 0.64
Sf3a1Q8K4Z5 AC159106.1-201ENSMUST00000224421 690 ntBASIC19.05■□□□□ 0.64
Sf3a1Q8K4Z5 AC154757.1-201ENSMUST00000228289 336 ntBASIC19.05■□□□□ 0.64
Sf3a1Q8K4Z5 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC19.05■□□□□ 0.64
Sf3a1Q8K4Z5 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sf3a1Q8K4Z5 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sf3a1Q8K4Z5 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
Sf3a1Q8K4Z5 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sf3a1Q8K4Z5 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sf3a1Q8K4Z5 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sf3a1Q8K4Z5 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sf3a1Q8K4Z5 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sf3a1Q8K4Z5 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC19.04■□□□□ 0.64
Sf3a1Q8K4Z5 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sf3a1Q8K4Z5 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sf3a1Q8K4Z5 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sf3a1Q8K4Z5 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sf3a1Q8K4Z5 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sf3a1Q8K4Z5 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sf3a1Q8K4Z5 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sf3a1Q8K4Z5 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
Sf3a1Q8K4Z5 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
Sf3a1Q8K4Z5 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sf3a1Q8K4Z5 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sf3a1Q8K4Z5 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms