Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.48■□□□□ 0.23
Ccdc28aQ8CEI3 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Ccdc28aQ8CEI3 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc28aQ8CEI3 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc28aQ8CEI3 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc28aQ8CEI3 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc28aQ8CEI3 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc28aQ8CEI3 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc28aQ8CEI3 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc28aQ8CEI3 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc28aQ8CEI3 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc28aQ8CEI3 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc28aQ8CEI3 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc28aQ8CEI3 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc28aQ8CEI3 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc28aQ8CEI3 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Ccdc28aQ8CEI3 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.47■□□□□ 0.23
Ccdc28aQ8CEI3 Gm22697-201ENSMUST00000175194 63 ntBASIC16.47■□□□□ 0.23
Ccdc28aQ8CEI3 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Ccdc28aQ8CEI3 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.47■□□□□ 0.23
Ccdc28aQ8CEI3 Gm43799-201ENSMUST00000201845 579 ntBASIC16.47■□□□□ 0.23
Ccdc28aQ8CEI3 Gm18101-201ENSMUST00000215769 548 ntBASIC16.47■□□□□ 0.23
Ccdc28aQ8CEI3 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Ccdc28aQ8CEI3 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.47■□□□□ 0.23
Ccdc28aQ8CEI3 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc28aQ8CEI3 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
Ccdc28aQ8CEI3 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.47■□□□□ 0.23
Ccdc28aQ8CEI3 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.47■□□□□ 0.23
Ccdc28aQ8CEI3 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc28aQ8CEI3 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.47■□□□□ 0.23
Ccdc28aQ8CEI3 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc28aQ8CEI3 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc28aQ8CEI3 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc28aQ8CEI3 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc28aQ8CEI3 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Ccdc28aQ8CEI3 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.46■□□□□ 0.23
Ccdc28aQ8CEI3 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc28aQ8CEI3 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Ccdc28aQ8CEI3 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc28aQ8CEI3 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.46■□□□□ 0.23
Ccdc28aQ8CEI3 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.46■□□□□ 0.23
Ccdc28aQ8CEI3 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc28aQ8CEI3 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.46■□□□□ 0.23
Ccdc28aQ8CEI3 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Ccdc28aQ8CEI3 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc28aQ8CEI3 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc28aQ8CEI3 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc28aQ8CEI3 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc28aQ8CEI3 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc28aQ8CEI3 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.46■□□□□ 0.23
Ccdc28aQ8CEI3 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.46■□□□□ 0.23
Ccdc28aQ8CEI3 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.46■□□□□ 0.23
Ccdc28aQ8CEI3 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.46■□□□□ 0.23
Ccdc28aQ8CEI3 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Ccdc28aQ8CEI3 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Ccdc28aQ8CEI3 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc28aQ8CEI3 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc28aQ8CEI3 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc28aQ8CEI3 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc28aQ8CEI3 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc28aQ8CEI3 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Ccdc28aQ8CEI3 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc28aQ8CEI3 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc28aQ8CEI3 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Ccdc28aQ8CEI3 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc28aQ8CEI3 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc28aQ8CEI3 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Ccdc28aQ8CEI3 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc28aQ8CEI3 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc28aQ8CEI3 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.45■□□□□ 0.22
Ccdc28aQ8CEI3 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc28aQ8CEI3 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Ccdc28aQ8CEI3 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.45■□□□□ 0.22
Ccdc28aQ8CEI3 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Ccdc28aQ8CEI3 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.45■□□□□ 0.22
Ccdc28aQ8CEI3 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc28aQ8CEI3 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Ccdc28aQ8CEI3 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc28aQ8CEI3 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc28aQ8CEI3 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc28aQ8CEI3 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc28aQ8CEI3 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.45■□□□□ 0.22
Ccdc28aQ8CEI3 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc28aQ8CEI3 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc28aQ8CEI3 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.44■□□□□ 0.22
Ccdc28aQ8CEI3 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc28aQ8CEI3 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc28aQ8CEI3 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.44■□□□□ 0.22
Ccdc28aQ8CEI3 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc28aQ8CEI3 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc28aQ8CEI3 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.44■□□□□ 0.22
Ccdc28aQ8CEI3 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc28aQ8CEI3 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Ccdc28aQ8CEI3 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc28aQ8CEI3 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Ccdc28aQ8CEI3 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Ccdc28aQ8CEI3 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.44■□□□□ 0.22
Ccdc28aQ8CEI3 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.44■□□□□ 0.22
Ccdc28aQ8CEI3 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.44■□□□□ 0.22
Ccdc28aQ8CEI3 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 123.5 ms