Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vcpip1Q8CDG3 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.77■□□□□ 0.28
Vcpip1Q8CDG3 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vcpip1Q8CDG3 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vcpip1Q8CDG3 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Vcpip1Q8CDG3 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.77■□□□□ 0.28
Vcpip1Q8CDG3 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Vcpip1Q8CDG3 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
Vcpip1Q8CDG3 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vcpip1Q8CDG3 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vcpip1Q8CDG3 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vcpip1Q8CDG3 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.77■□□□□ 0.28
Vcpip1Q8CDG3 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.77■□□□□ 0.28
Vcpip1Q8CDG3 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vcpip1Q8CDG3 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vcpip1Q8CDG3 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.77■□□□□ 0.27
Vcpip1Q8CDG3 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Vcpip1Q8CDG3 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
Vcpip1Q8CDG3 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Vcpip1Q8CDG3 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Vcpip1Q8CDG3 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Vcpip1Q8CDG3 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vcpip1Q8CDG3 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vcpip1Q8CDG3 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.76■□□□□ 0.27
Vcpip1Q8CDG3 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Vcpip1Q8CDG3 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vcpip1Q8CDG3 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vcpip1Q8CDG3 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Vcpip1Q8CDG3 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.76■□□□□ 0.27
Vcpip1Q8CDG3 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Vcpip1Q8CDG3 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vcpip1Q8CDG3 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Vcpip1Q8CDG3 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Vcpip1Q8CDG3 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vcpip1Q8CDG3 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Vcpip1Q8CDG3 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vcpip1Q8CDG3 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.76■□□□□ 0.27
Vcpip1Q8CDG3 Gm6257-201ENSMUST00000163864 910 ntBASIC16.76■□□□□ 0.27
Vcpip1Q8CDG3 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.76■□□□□ 0.27
Vcpip1Q8CDG3 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Vcpip1Q8CDG3 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vcpip1Q8CDG3 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vcpip1Q8CDG3 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Vcpip1Q8CDG3 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Vcpip1Q8CDG3 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vcpip1Q8CDG3 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vcpip1Q8CDG3 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vcpip1Q8CDG3 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vcpip1Q8CDG3 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vcpip1Q8CDG3 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Vcpip1Q8CDG3 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vcpip1Q8CDG3 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Vcpip1Q8CDG3 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Vcpip1Q8CDG3 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Vcpip1Q8CDG3 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vcpip1Q8CDG3 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vcpip1Q8CDG3 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vcpip1Q8CDG3 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vcpip1Q8CDG3 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vcpip1Q8CDG3 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Vcpip1Q8CDG3 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.75■□□□□ 0.27
Vcpip1Q8CDG3 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.75■□□□□ 0.27
Vcpip1Q8CDG3 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.75■□□□□ 0.27
Vcpip1Q8CDG3 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vcpip1Q8CDG3 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vcpip1Q8CDG3 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Vcpip1Q8CDG3 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vcpip1Q8CDG3 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vcpip1Q8CDG3 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Vcpip1Q8CDG3 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Vcpip1Q8CDG3 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Vcpip1Q8CDG3 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Vcpip1Q8CDG3 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vcpip1Q8CDG3 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Vcpip1Q8CDG3 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vcpip1Q8CDG3 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.74■□□□□ 0.27
Vcpip1Q8CDG3 Sybu-209ENSMUST00000228639 4113 ntBASIC16.74■□□□□ 0.27
Vcpip1Q8CDG3 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vcpip1Q8CDG3 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vcpip1Q8CDG3 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vcpip1Q8CDG3 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vcpip1Q8CDG3 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.74■□□□□ 0.27
Vcpip1Q8CDG3 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.74■□□□□ 0.27
Vcpip1Q8CDG3 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.74■□□□□ 0.27
Vcpip1Q8CDG3 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.74■□□□□ 0.27
Vcpip1Q8CDG3 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.74■□□□□ 0.27
Vcpip1Q8CDG3 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vcpip1Q8CDG3 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vcpip1Q8CDG3 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vcpip1Q8CDG3 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Vcpip1Q8CDG3 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vcpip1Q8CDG3 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vcpip1Q8CDG3 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vcpip1Q8CDG3 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Vcpip1Q8CDG3 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vcpip1Q8CDG3 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vcpip1Q8CDG3 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vcpip1Q8CDG3 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vcpip1Q8CDG3 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.73■□□□□ 0.27
Vcpip1Q8CDG3 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms