Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.43■□□□□ 0.22
Uba3Q8C878 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Uba3Q8C878 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Uba3Q8C878 Gm7862-201ENSMUST00000121461 292 ntBASIC16.43■□□□□ 0.22
Uba3Q8C878 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.43■□□□□ 0.22
Uba3Q8C878 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Uba3Q8C878 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.43■□□□□ 0.22
Uba3Q8C878 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Uba3Q8C878 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Uba3Q8C878 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Uba3Q8C878 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Uba3Q8C878 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Uba3Q8C878 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Uba3Q8C878 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Uba3Q8C878 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Uba3Q8C878 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Uba3Q8C878 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Uba3Q8C878 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Uba3Q8C878 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Uba3Q8C878 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Uba3Q8C878 Gm25990-201ENSMUST00000102440 86 ntBASIC16.42■□□□□ 0.22
Uba3Q8C878 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Uba3Q8C878 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Uba3Q8C878 Gm27646-201ENSMUST00000183989 110 ntBASIC16.42■□□□□ 0.22
Uba3Q8C878 Gm19164-201ENSMUST00000210667 640 ntBASIC16.42■□□□□ 0.22
Uba3Q8C878 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.42■□□□□ 0.22
Uba3Q8C878 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.42■□□□□ 0.22
Uba3Q8C878 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Uba3Q8C878 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Uba3Q8C878 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Uba3Q8C878 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Uba3Q8C878 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Uba3Q8C878 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Uba3Q8C878 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Uba3Q8C878 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Uba3Q8C878 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Uba3Q8C878 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Uba3Q8C878 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Uba3Q8C878 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.42■□□□□ 0.22
Uba3Q8C878 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Uba3Q8C878 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Uba3Q8C878 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Uba3Q8C878 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Uba3Q8C878 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Uba3Q8C878 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Uba3Q8C878 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.41■□□□□ 0.22
Uba3Q8C878 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.41■□□□□ 0.22
Uba3Q8C878 Gm8344-201ENSMUST00000119813 856 ntBASIC16.41■□□□□ 0.22
Uba3Q8C878 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.41■□□□□ 0.22
Uba3Q8C878 Gm6089-201ENSMUST00000197666 938 ntBASIC16.41■□□□□ 0.22
Uba3Q8C878 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Uba3Q8C878 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.41■□□□□ 0.22
Uba3Q8C878 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Uba3Q8C878 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.41■□□□□ 0.22
Uba3Q8C878 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Uba3Q8C878 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Uba3Q8C878 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Uba3Q8C878 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Uba3Q8C878 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Uba3Q8C878 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Uba3Q8C878 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Uba3Q8C878 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Uba3Q8C878 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Uba3Q8C878 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.4■□□□□ 0.22
Uba3Q8C878 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Uba3Q8C878 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Uba3Q8C878 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Uba3Q8C878 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Uba3Q8C878 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Uba3Q8C878 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Uba3Q8C878 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.4■□□□□ 0.22
Uba3Q8C878 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.4■□□□□ 0.22
Uba3Q8C878 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Uba3Q8C878 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Uba3Q8C878 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Uba3Q8C878 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Uba3Q8C878 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Uba3Q8C878 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Uba3Q8C878 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Uba3Q8C878 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Uba3Q8C878 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Uba3Q8C878 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Uba3Q8C878 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.22
Uba3Q8C878 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Uba3Q8C878 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Uba3Q8C878 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Uba3Q8C878 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.39■□□□□ 0.21
Uba3Q8C878 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Uba3Q8C878 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Uba3Q8C878 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Uba3Q8C878 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Uba3Q8C878 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Uba3Q8C878 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Uba3Q8C878 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.39■□□□□ 0.21
Uba3Q8C878 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Uba3Q8C878 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Uba3Q8C878 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Uba3Q8C878 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Uba3Q8C878 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Uba3Q8C878 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms