Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Gm8062-201ENSMUST00000139696 444 ntBASIC12.22□□□□□ -0.45
Chd9Q8BYH8 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.22□□□□□ -0.45
Chd9Q8BYH8 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Chd9Q8BYH8 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.22□□□□□ -0.45
Chd9Q8BYH8 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chd9Q8BYH8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Chd9Q8BYH8 Gm20628-201ENSMUST00000177363 3215 ntBASIC12.22□□□□□ -0.45
Chd9Q8BYH8 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Chd9Q8BYH8 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chd9Q8BYH8 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chd9Q8BYH8 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chd9Q8BYH8 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chd9Q8BYH8 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.21□□□□□ -0.45
Chd9Q8BYH8 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.21□□□□□ -0.45
Chd9Q8BYH8 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Chd9Q8BYH8 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chd9Q8BYH8 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chd9Q8BYH8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chd9Q8BYH8 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chd9Q8BYH8 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chd9Q8BYH8 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chd9Q8BYH8 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chd9Q8BYH8 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chd9Q8BYH8 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chd9Q8BYH8 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chd9Q8BYH8 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chd9Q8BYH8 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chd9Q8BYH8 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.21□□□□□ -0.45
Chd9Q8BYH8 Gm15321-201ENSMUST00000121290 288 ntBASIC12.21□□□□□ -0.45
Chd9Q8BYH8 AU022133-201ENSMUST00000200601 873 ntBASIC12.21□□□□□ -0.45
Chd9Q8BYH8 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.21□□□□□ -0.45
Chd9Q8BYH8 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.21□□□□□ -0.45
Chd9Q8BYH8 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.21□□□□□ -0.45
Chd9Q8BYH8 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chd9Q8BYH8 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chd9Q8BYH8 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Chd9Q8BYH8 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chd9Q8BYH8 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chd9Q8BYH8 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chd9Q8BYH8 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC12.21□□□□□ -0.46
Chd9Q8BYH8 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chd9Q8BYH8 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chd9Q8BYH8 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chd9Q8BYH8 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd9Q8BYH8 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd9Q8BYH8 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Chd9Q8BYH8 Gm13392-201ENSMUST00000117708 150 ntBASIC12.2□□□□□ -0.46
Chd9Q8BYH8 Gm18753-201ENSMUST00000201000 566 ntBASIC12.2□□□□□ -0.46
Chd9Q8BYH8 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Chd9Q8BYH8 Gm18622-201ENSMUST00000219361 595 ntBASIC12.2□□□□□ -0.46
Chd9Q8BYH8 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd9Q8BYH8 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Chd9Q8BYH8 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC12.2□□□□□ -0.46
Chd9Q8BYH8 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd9Q8BYH8 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd9Q8BYH8 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd9Q8BYH8 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd9Q8BYH8 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.2□□□□□ -0.46
Chd9Q8BYH8 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd9Q8BYH8 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.2□□□□□ -0.46
Chd9Q8BYH8 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chd9Q8BYH8 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chd9Q8BYH8 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd9Q8BYH8 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chd9Q8BYH8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Chd9Q8BYH8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chd9Q8BYH8 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd9Q8BYH8 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd9Q8BYH8 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd9Q8BYH8 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chd9Q8BYH8 Rpph1-201ENSMUST00000175096 319 ntBASIC12.2□□□□□ -0.46
Chd9Q8BYH8 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd9Q8BYH8 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Chd9Q8BYH8 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Chd9Q8BYH8 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd9Q8BYH8 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chd9Q8BYH8 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd9Q8BYH8 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd9Q8BYH8 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd9Q8BYH8 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.19□□□□□ -0.46
Chd9Q8BYH8 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd9Q8BYH8 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd9Q8BYH8 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Chd9Q8BYH8 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd9Q8BYH8 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Chd9Q8BYH8 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.19□□□□□ -0.46
Chd9Q8BYH8 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Chd9Q8BYH8 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd9Q8BYH8 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.19□□□□□ -0.46
Chd9Q8BYH8 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd9Q8BYH8 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd9Q8BYH8 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd9Q8BYH8 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd9Q8BYH8 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd9Q8BYH8 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd9Q8BYH8 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd9Q8BYH8 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.19□□□□□ -0.46
Chd9Q8BYH8 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.19□□□□□ -0.46
Chd9Q8BYH8 Gm9063-201ENSMUST00000223299 582 ntBASIC12.19□□□□□ -0.46
Chd9Q8BYH8 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms