Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.09□□□□□ -0.31
Smg1Q8BKX6 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smg1Q8BKX6 Gm4518-201ENSMUST00000182638 718 ntBASIC13.09□□□□□ -0.31
Smg1Q8BKX6 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.09□□□□□ -0.31
Smg1Q8BKX6 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.09□□□□□ -0.31
Smg1Q8BKX6 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.09□□□□□ -0.31
Smg1Q8BKX6 Gm18766-201ENSMUST00000189811 808 ntBASIC13.09□□□□□ -0.31
Smg1Q8BKX6 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Smg1Q8BKX6 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.09□□□□□ -0.31
Smg1Q8BKX6 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.09□□□□□ -0.31
Smg1Q8BKX6 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smg1Q8BKX6 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Smg1Q8BKX6 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smg1Q8BKX6 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smg1Q8BKX6 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smg1Q8BKX6 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smg1Q8BKX6 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smg1Q8BKX6 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smg1Q8BKX6 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smg1Q8BKX6 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.09□□□□□ -0.31
Smg1Q8BKX6 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.09□□□□□ -0.31
Smg1Q8BKX6 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smg1Q8BKX6 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.09□□□□□ -0.31
Smg1Q8BKX6 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smg1Q8BKX6 Gm6266-201ENSMUST00000203844 806 ntBASIC13.09□□□□□ -0.31
Smg1Q8BKX6 Gm45668-201ENSMUST00000211271 493 ntBASIC13.09□□□□□ -0.31
Smg1Q8BKX6 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.09□□□□□ -0.31
Smg1Q8BKX6 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smg1Q8BKX6 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smg1Q8BKX6 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Smg1Q8BKX6 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.08□□□□□ -0.31
Smg1Q8BKX6 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Smg1Q8BKX6 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Smg1Q8BKX6 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smg1Q8BKX6 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smg1Q8BKX6 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smg1Q8BKX6 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.08□□□□□ -0.32
Smg1Q8BKX6 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smg1Q8BKX6 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smg1Q8BKX6 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smg1Q8BKX6 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smg1Q8BKX6 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.08□□□□□ -0.32
Smg1Q8BKX6 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smg1Q8BKX6 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smg1Q8BKX6 Gm7787-201ENSMUST00000216858 688 ntBASIC13.08□□□□□ -0.32
Smg1Q8BKX6 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smg1Q8BKX6 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smg1Q8BKX6 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smg1Q8BKX6 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Smg1Q8BKX6 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC13.08□□□□□ -0.32
Smg1Q8BKX6 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.08□□□□□ -0.32
Smg1Q8BKX6 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smg1Q8BKX6 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smg1Q8BKX6 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smg1Q8BKX6 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.08□□□□□ -0.32
Smg1Q8BKX6 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smg1Q8BKX6 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smg1Q8BKX6 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smg1Q8BKX6 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smg1Q8BKX6 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Smg1Q8BKX6 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smg1Q8BKX6 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smg1Q8BKX6 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smg1Q8BKX6 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smg1Q8BKX6 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smg1Q8BKX6 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smg1Q8BKX6 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.07□□□□□ -0.32
Smg1Q8BKX6 App-207ENSMUST00000227737 2827 ntBASIC13.07□□□□□ -0.32
Smg1Q8BKX6 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.07□□□□□ -0.32
Smg1Q8BKX6 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.07□□□□□ -0.32
Smg1Q8BKX6 Gm45384-201ENSMUST00000210451 277 ntBASIC13.07□□□□□ -0.32
Smg1Q8BKX6 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.07□□□□□ -0.32
Smg1Q8BKX6 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.07□□□□□ -0.32
Smg1Q8BKX6 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.07□□□□□ -0.32
Smg1Q8BKX6 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Smg1Q8BKX6 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smg1Q8BKX6 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.07□□□□□ -0.32
Smg1Q8BKX6 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smg1Q8BKX6 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smg1Q8BKX6 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Smg1Q8BKX6 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smg1Q8BKX6 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smg1Q8BKX6 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smg1Q8BKX6 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.06□□□□□ -0.32
Smg1Q8BKX6 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.06□□□□□ -0.32
Smg1Q8BKX6 Gm36967-201ENSMUST00000193814 266 ntBASIC13.06□□□□□ -0.32
Smg1Q8BKX6 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smg1Q8BKX6 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smg1Q8BKX6 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smg1Q8BKX6 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smg1Q8BKX6 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smg1Q8BKX6 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Smg1Q8BKX6 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smg1Q8BKX6 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.06□□□□□ -0.32
Smg1Q8BKX6 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.06□□□□□ -0.32
Smg1Q8BKX6 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smg1Q8BKX6 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smg1Q8BKX6 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smg1Q8BKX6 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Smg1Q8BKX6 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms