Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Srrm4Q8BKA3 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Srrm4Q8BKA3 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Srrm4Q8BKA3 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Srrm4Q8BKA3 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
Srrm4Q8BKA3 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.24
Srrm4Q8BKA3 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Srrm4Q8BKA3 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Srrm4Q8BKA3 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Srrm4Q8BKA3 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Srrm4Q8BKA3 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Srrm4Q8BKA3 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Srrm4Q8BKA3 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Srrm4Q8BKA3 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Srrm4Q8BKA3 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.52□□□□□ -0.25
Srrm4Q8BKA3 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Srrm4Q8BKA3 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.52□□□□□ -0.25
Srrm4Q8BKA3 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Srrm4Q8BKA3 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.52□□□□□ -0.25
Srrm4Q8BKA3 Mir8098-201ENSMUST00000184011 137 ntBASIC13.52□□□□□ -0.25
Srrm4Q8BKA3 Gm44357-201ENSMUST00000195897 142 ntBASIC13.52□□□□□ -0.25
Srrm4Q8BKA3 Gm19658-201ENSMUST00000196231 138 ntBASIC13.52□□□□□ -0.25
Srrm4Q8BKA3 Gm44367-201ENSMUST00000196836 138 ntBASIC13.52□□□□□ -0.25
Srrm4Q8BKA3 Gm44350-201ENSMUST00000197197 138 ntBASIC13.52□□□□□ -0.25
Srrm4Q8BKA3 Gm44390-201ENSMUST00000197533 144 ntBASIC13.52□□□□□ -0.25
Srrm4Q8BKA3 Gm44313-201ENSMUST00000198018 138 ntBASIC13.52□□□□□ -0.25
Srrm4Q8BKA3 Gm44486-201ENSMUST00000198508 138 ntBASIC13.52□□□□□ -0.25
Srrm4Q8BKA3 Gm44314-201ENSMUST00000199263 138 ntBASIC13.52□□□□□ -0.25
Srrm4Q8BKA3 Gm44394-201ENSMUST00000199558 138 ntBASIC13.52□□□□□ -0.25
Srrm4Q8BKA3 Gm44484-201ENSMUST00000199873 138 ntBASIC13.52□□□□□ -0.25
Srrm4Q8BKA3 Gm44466-201ENSMUST00000200264 138 ntBASIC13.52□□□□□ -0.25
Srrm4Q8BKA3 Gm44359-201ENSMUST00000200671 138 ntBASIC13.52□□□□□ -0.25
Srrm4Q8BKA3 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Srrm4Q8BKA3 Gm6296-201ENSMUST00000222599 943 ntBASIC13.52□□□□□ -0.25
Srrm4Q8BKA3 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Srrm4Q8BKA3 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.52□□□□□ -0.25
Srrm4Q8BKA3 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Srrm4Q8BKA3 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.52□□□□□ -0.25
Srrm4Q8BKA3 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Srrm4Q8BKA3 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Srrm4Q8BKA3 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Srrm4Q8BKA3 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Srrm4Q8BKA3 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Srrm4Q8BKA3 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Gm11452-201ENSMUST00000122376 690 ntBASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Gm8825-201ENSMUST00000182565 998 ntBASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Gm4518-201ENSMUST00000182638 718 ntBASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Gm8655-201ENSMUST00000221159 852 ntBASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Rps4l-201ENSMUST00000071745 943 ntBASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Srrm4Q8BKA3 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Srrm4Q8BKA3 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Srrm4Q8BKA3 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Srrm4Q8BKA3 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Srrm4Q8BKA3 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Srrm4Q8BKA3 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Srrm4Q8BKA3 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.5□□□□□ -0.25
Srrm4Q8BKA3 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms