Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc40Q8BI79 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc40Q8BI79 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc40Q8BI79 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc40Q8BI79 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc40Q8BI79 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc40Q8BI79 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc40Q8BI79 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc40Q8BI79 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc40Q8BI79 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ccdc40Q8BI79 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc40Q8BI79 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc40Q8BI79 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc40Q8BI79 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc40Q8BI79 Mir6404-201ENSMUST00000183699 94 ntBASIC16.31■□□□□ 0.2
Ccdc40Q8BI79 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.31■□□□□ 0.2
Ccdc40Q8BI79 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Ccdc40Q8BI79 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ccdc40Q8BI79 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc40Q8BI79 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc40Q8BI79 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.31■□□□□ 0.2
Ccdc40Q8BI79 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc40Q8BI79 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc40Q8BI79 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc40Q8BI79 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc40Q8BI79 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc40Q8BI79 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc40Q8BI79 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc40Q8BI79 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Ccdc40Q8BI79 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.3■□□□□ 0.2
Ccdc40Q8BI79 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.3■□□□□ 0.2
Ccdc40Q8BI79 Gm13312-201ENSMUST00000119631 718 ntBASIC16.3■□□□□ 0.2
Ccdc40Q8BI79 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc40Q8BI79 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.3■□□□□ 0.2
Ccdc40Q8BI79 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.3■□□□□ 0.2
Ccdc40Q8BI79 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.3■□□□□ 0.2
Ccdc40Q8BI79 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.3■□□□□ 0.2
Ccdc40Q8BI79 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc40Q8BI79 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc40Q8BI79 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ccdc40Q8BI79 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Ccdc40Q8BI79 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc40Q8BI79 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc40Q8BI79 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Ccdc40Q8BI79 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc40Q8BI79 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc40Q8BI79 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.3■□□□□ 0.2
Ccdc40Q8BI79 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc40Q8BI79 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.29■□□□□ 0.2
Ccdc40Q8BI79 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ccdc40Q8BI79 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc40Q8BI79 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc40Q8BI79 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ccdc40Q8BI79 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.29■□□□□ 0.2
Ccdc40Q8BI79 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc40Q8BI79 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.29■□□□□ 0.2
Ccdc40Q8BI79 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc40Q8BI79 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc40Q8BI79 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc40Q8BI79 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.29■□□□□ 0.2
Ccdc40Q8BI79 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc40Q8BI79 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc40Q8BI79 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc40Q8BI79 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.29■□□□□ 0.2
Ccdc40Q8BI79 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc40Q8BI79 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc40Q8BI79 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.29■□□□□ 0.2
Ccdc40Q8BI79 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc40Q8BI79 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc40Q8BI79 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc40Q8BI79 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc40Q8BI79 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc40Q8BI79 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc40Q8BI79 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc40Q8BI79 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc40Q8BI79 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc40Q8BI79 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.28■□□□□ 0.2
Ccdc40Q8BI79 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc40Q8BI79 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc40Q8BI79 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc40Q8BI79 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.28■□□□□ 0.2
Ccdc40Q8BI79 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc40Q8BI79 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Ccdc40Q8BI79 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc40Q8BI79 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ccdc40Q8BI79 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc40Q8BI79 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc40Q8BI79 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc40Q8BI79 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.28■□□□□ 0.2
Ccdc40Q8BI79 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ccdc40Q8BI79 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc40Q8BI79 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc40Q8BI79 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc40Q8BI79 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc40Q8BI79 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc40Q8BI79 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc40Q8BI79 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc40Q8BI79 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc40Q8BI79 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc40Q8BI79 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms