Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rnf38Q8BI21 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf38Q8BI21 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf38Q8BI21 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rnf38Q8BI21 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rnf38Q8BI21 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rnf38Q8BI21 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.08■□□□□ 0
Rnf38Q8BI21 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.08■□□□□ 0
Rnf38Q8BI21 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf38Q8BI21 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Rnf38Q8BI21 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf38Q8BI21 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.08■□□□□ 0
Rnf38Q8BI21 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf38Q8BI21 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf38Q8BI21 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Rnf38Q8BI21 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf38Q8BI21 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf38Q8BI21 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rnf38Q8BI21 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf38Q8BI21 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rnf38Q8BI21 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rnf38Q8BI21 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.07■□□□□ 0
Rnf38Q8BI21 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rnf38Q8BI21 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.07■□□□□ 0
Rnf38Q8BI21 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf38Q8BI21 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rnf38Q8BI21 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf38Q8BI21 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Rnf38Q8BI21 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf38Q8BI21 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf38Q8BI21 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf38Q8BI21 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rnf38Q8BI21 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.07■□□□□ 0
Rnf38Q8BI21 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf38Q8BI21 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf38Q8BI21 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.07■□□□□ 0
Rnf38Q8BI21 Gm5587-201ENSMUST00000206270 674 ntBASIC15.07■□□□□ 0
Rnf38Q8BI21 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rnf38Q8BI21 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Rnf38Q8BI21 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf38Q8BI21 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf38Q8BI21 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf38Q8BI21 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf38Q8BI21 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf38Q8BI21 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf38Q8BI21 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf38Q8BI21 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf38Q8BI21 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf38Q8BI21 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf38Q8BI21 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf38Q8BI21 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.07■□□□□ 0
Rnf38Q8BI21 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rnf38Q8BI21 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Rnf38Q8BI21 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Rnf38Q8BI21 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Rnf38Q8BI21 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf38Q8BI21 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf38Q8BI21 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf38Q8BI21 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.06■□□□□ 0
Rnf38Q8BI21 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf38Q8BI21 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rnf38Q8BI21 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.06■□□□□ 0
Rnf38Q8BI21 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.06■□□□□ 0
Rnf38Q8BI21 AA414768-201ENSMUST00000121924 1257 ntBASIC15.06■□□□□ 0
Rnf38Q8BI21 Gm25016-201ENSMUST00000158399 131 ntBASIC15.06■□□□□ 0
Rnf38Q8BI21 Gm7977-201ENSMUST00000193787 748 ntBASIC15.06■□□□□ 0
Rnf38Q8BI21 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rnf38Q8BI21 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf38Q8BI21 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf38Q8BI21 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf38Q8BI21 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Rnf38Q8BI21 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf38Q8BI21 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf38Q8BI21 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Rnf38Q8BI21 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf38Q8BI21 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
Rnf38Q8BI21 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf38Q8BI21 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.05■□□□□ 0
Rnf38Q8BI21 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Rnf38Q8BI21 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rnf38Q8BI21 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rnf38Q8BI21 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Rnf38Q8BI21 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Rnf38Q8BI21 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf38Q8BI21 Gm6623-201ENSMUST00000173570 544 ntBASIC15.05■□□□□ -0
Rnf38Q8BI21 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.05■□□□□ -0
Rnf38Q8BI21 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rnf38Q8BI21 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.05■□□□□ -0
Rnf38Q8BI21 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf38Q8BI21 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf38Q8BI21 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.05■□□□□ -0
Rnf38Q8BI21 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf38Q8BI21 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf38Q8BI21 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rnf38Q8BI21 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.05■□□□□ -0
Rnf38Q8BI21 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.05■□□□□ -0
Rnf38Q8BI21 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf38Q8BI21 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.04■□□□□ -0
Rnf38Q8BI21 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rnf38Q8BI21 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms