Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.05■□□□□ 0.32
Ush1gQ80T11 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Ush1gQ80T11 Chchd1-203ENSMUST00000224633 557 ntBASIC17.05■□□□□ 0.32
Ush1gQ80T11 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ush1gQ80T11 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ush1gQ80T11 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ush1gQ80T11 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Ush1gQ80T11 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Ush1gQ80T11 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ush1gQ80T11 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ush1gQ80T11 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ush1gQ80T11 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ush1gQ80T11 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ush1gQ80T11 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ush1gQ80T11 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ush1gQ80T11 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.04■□□□□ 0.32
Ush1gQ80T11 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ush1gQ80T11 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ush1gQ80T11 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Ush1gQ80T11 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ush1gQ80T11 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Ush1gQ80T11 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ush1gQ80T11 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.04■□□□□ 0.32
Ush1gQ80T11 Gm37153-201ENSMUST00000193637 231 ntBASIC17.04■□□□□ 0.32
Ush1gQ80T11 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ush1gQ80T11 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ush1gQ80T11 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ush1gQ80T11 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ush1gQ80T11 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.04■□□□□ 0.32
Ush1gQ80T11 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ush1gQ80T11 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ush1gQ80T11 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ush1gQ80T11 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.04■□□□□ 0.32
Ush1gQ80T11 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ush1gQ80T11 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ush1gQ80T11 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ush1gQ80T11 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ush1gQ80T11 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ush1gQ80T11 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ush1gQ80T11 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ush1gQ80T11 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.03■□□□□ 0.32
Ush1gQ80T11 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ush1gQ80T11 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ush1gQ80T11 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ush1gQ80T11 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ush1gQ80T11 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ush1gQ80T11 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ush1gQ80T11 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ush1gQ80T11 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ush1gQ80T11 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ush1gQ80T11 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ush1gQ80T11 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ush1gQ80T11 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.03■□□□□ 0.32
Ush1gQ80T11 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ush1gQ80T11 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ush1gQ80T11 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ush1gQ80T11 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ush1gQ80T11 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ush1gQ80T11 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ush1gQ80T11 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.02■□□□□ 0.32
Ush1gQ80T11 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ush1gQ80T11 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ush1gQ80T11 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ush1gQ80T11 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ush1gQ80T11 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ush1gQ80T11 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ush1gQ80T11 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.02■□□□□ 0.32
Ush1gQ80T11 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.02■□□□□ 0.32
Ush1gQ80T11 Gm6257-201ENSMUST00000163864 910 ntBASIC17.02■□□□□ 0.32
Ush1gQ80T11 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ush1gQ80T11 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.02■□□□□ 0.32
Ush1gQ80T11 Gm5682-201ENSMUST00000173402 505 ntBASIC17.02■□□□□ 0.32
Ush1gQ80T11 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.02■□□□□ 0.32
Ush1gQ80T11 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ush1gQ80T11 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.02■□□□□ 0.32
Ush1gQ80T11 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ush1gQ80T11 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.02■□□□□ 0.32
Ush1gQ80T11 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ush1gQ80T11 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ush1gQ80T11 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ush1gQ80T11 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ush1gQ80T11 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ush1gQ80T11 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ush1gQ80T11 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ush1gQ80T11 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ush1gQ80T11 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Ush1gQ80T11 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ush1gQ80T11 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ush1gQ80T11 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ush1gQ80T11 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Ush1gQ80T11 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.01■□□□□ 0.31
Ush1gQ80T11 Gm8344-201ENSMUST00000119813 856 ntBASIC17.01■□□□□ 0.31
Ush1gQ80T11 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ush1gQ80T11 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.01■□□□□ 0.31
Ush1gQ80T11 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.01■□□□□ 0.31
Ush1gQ80T11 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ush1gQ80T11 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.01■□□□□ 0.31
Ush1gQ80T11 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ush1gQ80T11 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.01■□□□□ 0.31
Ush1gQ80T11 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms