Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf38bQ80SY5 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf38bQ80SY5 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Prpf38bQ80SY5 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.29■□□□□ 0.2
Prpf38bQ80SY5 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf38bQ80SY5 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.29■□□□□ 0.2
Prpf38bQ80SY5 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.29■□□□□ 0.2
Prpf38bQ80SY5 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC16.29■□□□□ 0.2
Prpf38bQ80SY5 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf38bQ80SY5 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf38bQ80SY5 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf38bQ80SY5 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf38bQ80SY5 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf38bQ80SY5 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf38bQ80SY5 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.29■□□□□ 0.2
Prpf38bQ80SY5 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Prpf38bQ80SY5 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf38bQ80SY5 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf38bQ80SY5 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.29■□□□□ 0.2
Prpf38bQ80SY5 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38bQ80SY5 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38bQ80SY5 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38bQ80SY5 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38bQ80SY5 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Prpf38bQ80SY5 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38bQ80SY5 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38bQ80SY5 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38bQ80SY5 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38bQ80SY5 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38bQ80SY5 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38bQ80SY5 Gm18421-201ENSMUST00000204122 625 ntBASIC16.28■□□□□ 0.2
Prpf38bQ80SY5 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Prpf38bQ80SY5 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Prpf38bQ80SY5 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38bQ80SY5 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38bQ80SY5 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38bQ80SY5 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Prpf38bQ80SY5 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38bQ80SY5 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38bQ80SY5 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38bQ80SY5 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Prpf38bQ80SY5 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38bQ80SY5 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38bQ80SY5 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38bQ80SY5 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf38bQ80SY5 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf38bQ80SY5 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf38bQ80SY5 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Prpf38bQ80SY5 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf38bQ80SY5 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf38bQ80SY5 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf38bQ80SY5 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf38bQ80SY5 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.27■□□□□ 0.2
Prpf38bQ80SY5 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf38bQ80SY5 Gm13616-201ENSMUST00000120600 222 ntBASIC16.27■□□□□ 0.2
Prpf38bQ80SY5 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.27■□□□□ 0.2
Prpf38bQ80SY5 Gm12497-201ENSMUST00000138778 237 ntBASIC16.27■□□□□ 0.2
Prpf38bQ80SY5 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf38bQ80SY5 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf38bQ80SY5 Mir7023-201ENSMUST00000185093 64 ntBASIC16.27■□□□□ 0.2
Prpf38bQ80SY5 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.27■□□□□ 0.2
Prpf38bQ80SY5 AC139382.1-201ENSMUST00000221402 498 ntBASIC16.27■□□□□ 0.2
Prpf38bQ80SY5 AC140375.2-201ENSMUST00000225283 584 ntBASIC16.27■□□□□ 0.2
Prpf38bQ80SY5 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf38bQ80SY5 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf38bQ80SY5 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.27■□□□□ 0.2
Prpf38bQ80SY5 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf38bQ80SY5 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Prpf38bQ80SY5 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.27■□□□□ 0.19
Prpf38bQ80SY5 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Prpf38bQ80SY5 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Prpf38bQ80SY5 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38bQ80SY5 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38bQ80SY5 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38bQ80SY5 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38bQ80SY5 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38bQ80SY5 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38bQ80SY5 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38bQ80SY5 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Prpf38bQ80SY5 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38bQ80SY5 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38bQ80SY5 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38bQ80SY5 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.26■□□□□ 0.19
Prpf38bQ80SY5 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.26■□□□□ 0.19
Prpf38bQ80SY5 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38bQ80SY5 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.26■□□□□ 0.19
Prpf38bQ80SY5 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC16.26■□□□□ 0.19
Prpf38bQ80SY5 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.26■□□□□ 0.19
Prpf38bQ80SY5 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38bQ80SY5 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38bQ80SY5 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38bQ80SY5 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38bQ80SY5 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38bQ80SY5 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38bQ80SY5 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.26■□□□□ 0.19
Prpf38bQ80SY5 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf38bQ80SY5 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Prpf38bQ80SY5 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf38bQ80SY5 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf38bQ80SY5 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms