Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vma21Q78T54 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vma21Q78T54 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vma21Q78T54 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vma21Q78T54 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vma21Q78T54 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vma21Q78T54 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vma21Q78T54 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vma21Q78T54 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vma21Q78T54 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vma21Q78T54 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vma21Q78T54 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vma21Q78T54 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vma21Q78T54 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Vma21Q78T54 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vma21Q78T54 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vma21Q78T54 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vma21Q78T54 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vma21Q78T54 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vma21Q78T54 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
Vma21Q78T54 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vma21Q78T54 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Vma21Q78T54 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vma21Q78T54 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Vma21Q78T54 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Vma21Q78T54 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vma21Q78T54 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Vma21Q78T54 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vma21Q78T54 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vma21Q78T54 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vma21Q78T54 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vma21Q78T54 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vma21Q78T54 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vma21Q78T54 Gm6433-201ENSMUST00000118634 875 ntBASIC12.72□□□□□ -0.37
Vma21Q78T54 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.72□□□□□ -0.37
Vma21Q78T54 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vma21Q78T54 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vma21Q78T54 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.72□□□□□ -0.37
Vma21Q78T54 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.72□□□□□ -0.37
Vma21Q78T54 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.72□□□□□ -0.37
Vma21Q78T54 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vma21Q78T54 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Vma21Q78T54 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vma21Q78T54 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vma21Q78T54 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vma21Q78T54 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vma21Q78T54 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Vma21Q78T54 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vma21Q78T54 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vma21Q78T54 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vma21Q78T54 AC154231.1-201ENSMUST00000220564 2175 ntBASIC12.71□□□□□ -0.37
Vma21Q78T54 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vma21Q78T54 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vma21Q78T54 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Vma21Q78T54 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vma21Q78T54 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vma21Q78T54 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Vma21Q78T54 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Vma21Q78T54 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vma21Q78T54 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vma21Q78T54 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Vma21Q78T54 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vma21Q78T54 Gm15565-201ENSMUST00000118890 427 ntBASIC12.71□□□□□ -0.37
Vma21Q78T54 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.71□□□□□ -0.37
Vma21Q78T54 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Vma21Q78T54 Mir6404-201ENSMUST00000183699 94 ntBASIC12.71□□□□□ -0.37
Vma21Q78T54 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.71□□□□□ -0.37
Vma21Q78T54 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.71□□□□□ -0.37
Vma21Q78T54 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vma21Q78T54 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Vma21Q78T54 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Vma21Q78T54 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vma21Q78T54 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Vma21Q78T54 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Vma21Q78T54 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Vma21Q78T54 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Vma21Q78T54 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vma21Q78T54 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vma21Q78T54 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.71□□□□□ -0.38
Vma21Q78T54 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vma21Q78T54 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vma21Q78T54 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Vma21Q78T54 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vma21Q78T54 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Vma21Q78T54 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Vma21Q78T54 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Vma21Q78T54 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vma21Q78T54 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.7□□□□□ -0.38
Vma21Q78T54 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vma21Q78T54 Mir770-201ENSMUST00000103252 94 ntBASIC12.7□□□□□ -0.38
Vma21Q78T54 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.7□□□□□ -0.38
Vma21Q78T54 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Vma21Q78T54 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vma21Q78T54 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vma21Q78T54 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.7□□□□□ -0.38
Vma21Q78T54 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Vma21Q78T54 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vma21Q78T54 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vma21Q78T54 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vma21Q78T54 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms