Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Gm25016-201ENSMUST00000158399 131 ntBASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Gm8825-201ENSMUST00000182565 998 ntBASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Gm4518-201ENSMUST00000182638 718 ntBASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Gm29518-201ENSMUST00000190858 372 ntBASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rad54bQ6PFE3 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rad54bQ6PFE3 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Rad54bQ6PFE3 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rad54bQ6PFE3 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rad54bQ6PFE3 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Rad54bQ6PFE3 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rad54bQ6PFE3 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rad54bQ6PFE3 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rad54bQ6PFE3 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rad54bQ6PFE3 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rad54bQ6PFE3 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rad54bQ6PFE3 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rad54bQ6PFE3 Rprl3-201ENSMUST00000157400 290 ntBASIC15.68■□□□□ 0.1
Rad54bQ6PFE3 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rad54bQ6PFE3 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.68■□□□□ 0.1
Rad54bQ6PFE3 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.68■□□□□ 0.1
Rad54bQ6PFE3 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rad54bQ6PFE3 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rad54bQ6PFE3 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rad54bQ6PFE3 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rad54bQ6PFE3 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Rad54bQ6PFE3 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rad54bQ6PFE3 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rad54bQ6PFE3 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rad54bQ6PFE3 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rad54bQ6PFE3 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Rad54bQ6PFE3 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rad54bQ6PFE3 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rad54bQ6PFE3 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rad54bQ6PFE3 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rad54bQ6PFE3 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Rad54bQ6PFE3 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.67■□□□□ 0.1
Rad54bQ6PFE3 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rad54bQ6PFE3 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rad54bQ6PFE3 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rad54bQ6PFE3 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.67■□□□□ 0.1
Rad54bQ6PFE3 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.67■□□□□ 0.1
Rad54bQ6PFE3 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rad54bQ6PFE3 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rad54bQ6PFE3 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rad54bQ6PFE3 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rad54bQ6PFE3 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rad54bQ6PFE3 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rad54bQ6PFE3 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rad54bQ6PFE3 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Rad54bQ6PFE3 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rad54bQ6PFE3 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rad54bQ6PFE3 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rad54bQ6PFE3 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rad54bQ6PFE3 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Rad54bQ6PFE3 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Rad54bQ6PFE3 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Rad54bQ6PFE3 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Rad54bQ6PFE3 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Rad54bQ6PFE3 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rad54bQ6PFE3 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rad54bQ6PFE3 Mir3081-201ENSMUST00000175305 84 ntBASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms