Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smchd1Q6P5D8 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smchd1Q6P5D8 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smchd1Q6P5D8 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smchd1Q6P5D8 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Smchd1Q6P5D8 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smchd1Q6P5D8 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smchd1Q6P5D8 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smchd1Q6P5D8 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Smchd1Q6P5D8 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smchd1Q6P5D8 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Smchd1Q6P5D8 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Smchd1Q6P5D8 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smchd1Q6P5D8 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.03■□□□□ 0.32
Smchd1Q6P5D8 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.03■□□□□ 0.32
Smchd1Q6P5D8 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smchd1Q6P5D8 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smchd1Q6P5D8 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.03■□□□□ 0.32
Smchd1Q6P5D8 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smchd1Q6P5D8 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smchd1Q6P5D8 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smchd1Q6P5D8 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smchd1Q6P5D8 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smchd1Q6P5D8 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smchd1Q6P5D8 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smchd1Q6P5D8 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smchd1Q6P5D8 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Smchd1Q6P5D8 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smchd1Q6P5D8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smchd1Q6P5D8 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.03■□□□□ 0.32
Smchd1Q6P5D8 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Smchd1Q6P5D8 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.03■□□□□ 0.32
Smchd1Q6P5D8 Gm27397-201ENSMUST00000184997 107 ntBASIC17.03■□□□□ 0.32
Smchd1Q6P5D8 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.03■□□□□ 0.32
Smchd1Q6P5D8 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.03■□□□□ 0.32
Smchd1Q6P5D8 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smchd1Q6P5D8 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.02■□□□□ 0.32
Smchd1Q6P5D8 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smchd1Q6P5D8 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.02■□□□□ 0.32
Smchd1Q6P5D8 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smchd1Q6P5D8 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smchd1Q6P5D8 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smchd1Q6P5D8 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smchd1Q6P5D8 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smchd1Q6P5D8 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smchd1Q6P5D8 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smchd1Q6P5D8 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.02■□□□□ 0.32
Smchd1Q6P5D8 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smchd1Q6P5D8 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smchd1Q6P5D8 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smchd1Q6P5D8 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smchd1Q6P5D8 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Smchd1Q6P5D8 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smchd1Q6P5D8 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smchd1Q6P5D8 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.01■□□□□ 0.31
Smchd1Q6P5D8 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smchd1Q6P5D8 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.01■□□□□ 0.31
Smchd1Q6P5D8 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.01■□□□□ 0.31
Smchd1Q6P5D8 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Smchd1Q6P5D8 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Smchd1Q6P5D8 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.01■□□□□ 0.31
Smchd1Q6P5D8 Gm27494-201ENSMUST00000184735 189 ntBASIC17.01■□□□□ 0.31
Smchd1Q6P5D8 Gm43125-201ENSMUST00000201724 730 ntBASIC17.01■□□□□ 0.31
Smchd1Q6P5D8 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smchd1Q6P5D8 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smchd1Q6P5D8 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smchd1Q6P5D8 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Smchd1Q6P5D8 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smchd1Q6P5D8 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Smchd1Q6P5D8 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smchd1Q6P5D8 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smchd1Q6P5D8 Gm2213-201ENSMUST00000197485 688 ntBASIC17.01■□□□□ 0.31
Smchd1Q6P5D8 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smchd1Q6P5D8 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Smchd1Q6P5D8 Gm29361-201ENSMUST00000183323 2000 ntBASIC17■□□□□ 0.31
Smchd1Q6P5D8 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smchd1Q6P5D8 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smchd1Q6P5D8 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17■□□□□ 0.31
Smchd1Q6P5D8 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smchd1Q6P5D8 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Smchd1Q6P5D8 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smchd1Q6P5D8 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC17■□□□□ 0.31
Smchd1Q6P5D8 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smchd1Q6P5D8 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smchd1Q6P5D8 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smchd1Q6P5D8 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smchd1Q6P5D8 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smchd1Q6P5D8 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smchd1Q6P5D8 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17■□□□□ 0.31
Smchd1Q6P5D8 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smchd1Q6P5D8 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smchd1Q6P5D8 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Smchd1Q6P5D8 Gm13332-201ENSMUST00000120451 1398 ntBASIC17■□□□□ 0.31
Smchd1Q6P5D8 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Smchd1Q6P5D8 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smchd1Q6P5D8 Gm10499-201ENSMUST00000174094 934 ntBASIC16.99■□□□□ 0.31
Smchd1Q6P5D8 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smchd1Q6P5D8 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.99■□□□□ 0.31
Smchd1Q6P5D8 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smchd1Q6P5D8 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms