Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tpm4Q6IRU2 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tpm4Q6IRU2 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tpm4Q6IRU2 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tpm4Q6IRU2 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tpm4Q6IRU2 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Tpm4Q6IRU2 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tpm4Q6IRU2 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tpm4Q6IRU2 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm4Q6IRU2 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm4Q6IRU2 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm4Q6IRU2 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm4Q6IRU2 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Tpm4Q6IRU2 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm4Q6IRU2 Gm6433-201ENSMUST00000118634 875 ntBASIC17.47■□□□□ 0.39
Tpm4Q6IRU2 Gm15565-201ENSMUST00000118890 427 ntBASIC17.47■□□□□ 0.39
Tpm4Q6IRU2 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.47■□□□□ 0.39
Tpm4Q6IRU2 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.47■□□□□ 0.39
Tpm4Q6IRU2 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Tpm4Q6IRU2 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Tpm4Q6IRU2 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.47■□□□□ 0.39
Tpm4Q6IRU2 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Tpm4Q6IRU2 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Tpm4Q6IRU2 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Tpm4Q6IRU2 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm4Q6IRU2 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm4Q6IRU2 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm4Q6IRU2 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm4Q6IRU2 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm4Q6IRU2 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm4Q6IRU2 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm4Q6IRU2 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm4Q6IRU2 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm4Q6IRU2 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm4Q6IRU2 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm4Q6IRU2 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Tpm4Q6IRU2 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm4Q6IRU2 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm4Q6IRU2 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm4Q6IRU2 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.47■□□□□ 0.39
Tpm4Q6IRU2 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm4Q6IRU2 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Tpm4Q6IRU2 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tpm4Q6IRU2 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tpm4Q6IRU2 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tpm4Q6IRU2 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.46■□□□□ 0.39
Tpm4Q6IRU2 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Tpm4Q6IRU2 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tpm4Q6IRU2 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tpm4Q6IRU2 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tpm4Q6IRU2 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tpm4Q6IRU2 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Tpm4Q6IRU2 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Tpm4Q6IRU2 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tpm4Q6IRU2 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tpm4Q6IRU2 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Tpm4Q6IRU2 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Tpm4Q6IRU2 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.46■□□□□ 0.39
Tpm4Q6IRU2 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Tpm4Q6IRU2 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
Tpm4Q6IRU2 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Tpm4Q6IRU2 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tpm4Q6IRU2 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Tpm4Q6IRU2 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tpm4Q6IRU2 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tpm4Q6IRU2 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Tpm4Q6IRU2 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm4Q6IRU2 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm4Q6IRU2 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm4Q6IRU2 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC17.45■□□□□ 0.38
Tpm4Q6IRU2 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Tpm4Q6IRU2 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm4Q6IRU2 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm4Q6IRU2 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Tpm4Q6IRU2 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Tpm4Q6IRU2 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.45■□□□□ 0.38
Tpm4Q6IRU2 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.45■□□□□ 0.38
Tpm4Q6IRU2 App-207ENSMUST00000227737 2827 ntBASIC17.45■□□□□ 0.38
Tpm4Q6IRU2 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm4Q6IRU2 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Tpm4Q6IRU2 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm4Q6IRU2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm4Q6IRU2 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm4Q6IRU2 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm4Q6IRU2 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.45■□□□□ 0.38
Tpm4Q6IRU2 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm4Q6IRU2 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.44■□□□□ 0.38
Tpm4Q6IRU2 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm4Q6IRU2 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm4Q6IRU2 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Tpm4Q6IRU2 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm4Q6IRU2 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm4Q6IRU2 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm4Q6IRU2 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm4Q6IRU2 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm4Q6IRU2 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm4Q6IRU2 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm4Q6IRU2 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.44■□□□□ 0.38
Tpm4Q6IRU2 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Tpm4Q6IRU2 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms