Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga7Q6DD96 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga7Q6DD96 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhga7Q6DD96 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga7Q6DD96 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga7Q6DD96 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga7Q6DD96 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.17■□□□□ 0.02
Pcdhga7Q6DD96 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhga7Q6DD96 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.17■□□□□ 0.02
Pcdhga7Q6DD96 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga7Q6DD96 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga7Q6DD96 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga7Q6DD96 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhga7Q6DD96 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga7Q6DD96 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga7Q6DD96 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga7Q6DD96 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga7Q6DD96 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.16■□□□□ 0.02
Pcdhga7Q6DD96 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga7Q6DD96 Gm15794-201ENSMUST00000120182 631 ntBASIC15.16■□□□□ 0.02
Pcdhga7Q6DD96 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga7Q6DD96 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.16■□□□□ 0.02
Pcdhga7Q6DD96 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhga7Q6DD96 Gm29518-201ENSMUST00000190858 372 ntBASIC15.16■□□□□ 0.02
Pcdhga7Q6DD96 Gm17808-201ENSMUST00000200859 894 ntBASIC15.16■□□□□ 0.02
Pcdhga7Q6DD96 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Pcdhga7Q6DD96 Gm45328-201ENSMUST00000210942 917 ntBASIC15.16■□□□□ 0.02
Pcdhga7Q6DD96 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdhga7Q6DD96 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga7Q6DD96 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga7Q6DD96 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga7Q6DD96 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga7Q6DD96 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga7Q6DD96 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhga7Q6DD96 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga7Q6DD96 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga7Q6DD96 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga7Q6DD96 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga7Q6DD96 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga7Q6DD96 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga7Q6DD96 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga7Q6DD96 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdhga7Q6DD96 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga7Q6DD96 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga7Q6DD96 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga7Q6DD96 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga7Q6DD96 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhga7Q6DD96 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhga7Q6DD96 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga7Q6DD96 Gm11434-201ENSMUST00000122379 629 ntBASIC15.14■□□□□ 0.01
Pcdhga7Q6DD96 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga7Q6DD96 Gm25016-201ENSMUST00000158399 131 ntBASIC15.14■□□□□ 0.01
Pcdhga7Q6DD96 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga7Q6DD96 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga7Q6DD96 Gm15823-201ENSMUST00000064305 670 ntBASIC15.14■□□□□ 0.01
Pcdhga7Q6DD96 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdhga7Q6DD96 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga7Q6DD96 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms