Protein–RNA interactions for Protein: Q6A009

Ltn1, E3 ubiquitin-protein ligase listerin, mousemouse

Predictions only

Length 1,767 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ltn1Q6A009 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ltn1Q6A009 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ltn1Q6A009 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ltn1Q6A009 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
Ltn1Q6A009 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ltn1Q6A009 Gm42934-201ENSMUST00000196920 1345 ntBASIC18.3■□□□□ 0.52
Ltn1Q6A009 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC18.3■□□□□ 0.52
Ltn1Q6A009 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC18.3■□□□□ 0.52
Ltn1Q6A009 Mir7684-201ENSMUST00000183858 60 ntBASIC18.3■□□□□ 0.52
Ltn1Q6A009 Gm27430-201ENSMUST00000184585 107 ntBASIC18.3■□□□□ 0.52
Ltn1Q6A009 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Ltn1Q6A009 Gm8597-201ENSMUST00000191525 1109 ntBASIC18.3■□□□□ 0.52
Ltn1Q6A009 Gm44333-201ENSMUST00000197168 107 ntBASIC18.3■□□□□ 0.52
Ltn1Q6A009 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC18.3■□□□□ 0.52
Ltn1Q6A009 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ltn1Q6A009 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC18.3■□□□□ 0.52
Ltn1Q6A009 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ltn1Q6A009 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ltn1Q6A009 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.29■□□□□ 0.52
Ltn1Q6A009 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ltn1Q6A009 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ltn1Q6A009 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ltn1Q6A009 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ltn1Q6A009 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ltn1Q6A009 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ltn1Q6A009 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC18.29■□□□□ 0.52
Ltn1Q6A009 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Ltn1Q6A009 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC18.29■□□□□ 0.52
Ltn1Q6A009 Gm28630-201ENSMUST00000187806 498 ntBASIC18.29■□□□□ 0.52
Ltn1Q6A009 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ltn1Q6A009 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ltn1Q6A009 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ltn1Q6A009 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ltn1Q6A009 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC18.28■□□□□ 0.52
Ltn1Q6A009 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ltn1Q6A009 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ltn1Q6A009 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Ltn1Q6A009 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ltn1Q6A009 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ltn1Q6A009 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ltn1Q6A009 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ltn1Q6A009 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Ltn1Q6A009 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ltn1Q6A009 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ltn1Q6A009 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC18.28■□□□□ 0.52
Ltn1Q6A009 Gm5745-201ENSMUST00000183748 313 ntBASIC18.28■□□□□ 0.52
Ltn1Q6A009 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC18.28■□□□□ 0.52
Ltn1Q6A009 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ltn1Q6A009 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ltn1Q6A009 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ltn1Q6A009 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ltn1Q6A009 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ltn1Q6A009 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Ltn1Q6A009 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ltn1Q6A009 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ltn1Q6A009 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ltn1Q6A009 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ltn1Q6A009 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC18.27■□□□□ 0.52
Ltn1Q6A009 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ltn1Q6A009 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ltn1Q6A009 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Ltn1Q6A009 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.27■□□□□ 0.52
Ltn1Q6A009 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ltn1Q6A009 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ltn1Q6A009 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.27■□□□□ 0.52
Ltn1Q6A009 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ltn1Q6A009 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ltn1Q6A009 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ltn1Q6A009 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ltn1Q6A009 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ltn1Q6A009 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ltn1Q6A009 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ltn1Q6A009 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC18.27■□□□□ 0.51
Ltn1Q6A009 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC18.27■□□□□ 0.51
Ltn1Q6A009 Gm27437-201ENSMUST00000183429 107 ntBASIC18.27■□□□□ 0.51
Ltn1Q6A009 Gm27680-201ENSMUST00000184192 160 ntBASIC18.27■□□□□ 0.51
Ltn1Q6A009 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Ltn1Q6A009 Gm43438-201ENSMUST00000198133 379 ntBASIC18.27■□□□□ 0.51
Ltn1Q6A009 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ltn1Q6A009 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Ltn1Q6A009 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
Ltn1Q6A009 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ltn1Q6A009 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ltn1Q6A009 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ltn1Q6A009 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ltn1Q6A009 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ltn1Q6A009 Gm18737-201ENSMUST00000173594 937 ntBASIC18.26■□□□□ 0.51
Ltn1Q6A009 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC18.26■□□□□ 0.51
Ltn1Q6A009 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ltn1Q6A009 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC18.26■□□□□ 0.51
Ltn1Q6A009 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC18.26■□□□□ 0.51
Ltn1Q6A009 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ltn1Q6A009 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ltn1Q6A009 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ltn1Q6A009 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ltn1Q6A009 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ltn1Q6A009 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ltn1Q6A009 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ltn1Q6A009 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
Ltn1Q6A009 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms