Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Trim27Q62158 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim27Q62158 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim27Q62158 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Trim27Q62158 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim27Q62158 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim27Q62158 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim27Q62158 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim27Q62158 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trim27Q62158 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC19.16■□□□□ 0.66
Trim27Q62158 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC19.16■□□□□ 0.66
Trim27Q62158 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Trim27Q62158 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Trim27Q62158 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim27Q62158 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim27Q62158 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC19.15■□□□□ 0.66
Trim27Q62158 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC19.15■□□□□ 0.66
Trim27Q62158 Gm4535-201ENSMUST00000182274 558 ntBASIC19.15■□□□□ 0.66
Trim27Q62158 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC19.15■□□□□ 0.66
Trim27Q62158 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim27Q62158 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC19.15■□□□□ 0.66
Trim27Q62158 Gm6296-201ENSMUST00000222599 943 ntBASIC19.15■□□□□ 0.66
Trim27Q62158 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim27Q62158 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim27Q62158 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC19.15■□□□□ 0.66
Trim27Q62158 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim27Q62158 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim27Q62158 Gm10355-201ENSMUST00000097146 517 ntBASIC19.15■□□□□ 0.66
Trim27Q62158 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim27Q62158 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim27Q62158 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Trim27Q62158 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Trim27Q62158 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC19.15■□□□□ 0.66
Trim27Q62158 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim27Q62158 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trim27Q62158 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Trim27Q62158 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trim27Q62158 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trim27Q62158 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC19.14■□□□□ 0.65
Trim27Q62158 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Trim27Q62158 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Trim27Q62158 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim27Q62158 Gm7286-201ENSMUST00000182691 1007 ntBASIC19.14■□□□□ 0.65
Trim27Q62158 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC19.14■□□□□ 0.65
Trim27Q62158 AC122024.2-201ENSMUST00000220086 871 ntBASIC19.14■□□□□ 0.65
Trim27Q62158 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC19.14■□□□□ 0.65
Trim27Q62158 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim27Q62158 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim27Q62158 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim27Q62158 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim27Q62158 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim27Q62158 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trim27Q62158 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim27Q62158 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim27Q62158 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim27Q62158 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim27Q62158 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim27Q62158 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim27Q62158 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim27Q62158 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim27Q62158 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim27Q62158 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim27Q62158 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim27Q62158 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Trim27Q62158 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim27Q62158 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim27Q62158 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Trim27Q62158 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim27Q62158 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Trim27Q62158 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Trim27Q62158 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim27Q62158 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim27Q62158 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim27Q62158 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
Trim27Q62158 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim27Q62158 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim27Q62158 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim27Q62158 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim27Q62158 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim27Q62158 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim27Q62158 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim27Q62158 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim27Q62158 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC19.12■□□□□ 0.65
Trim27Q62158 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Trim27Q62158 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trim27Q62158 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC19.12■□□□□ 0.65
Trim27Q62158 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim27Q62158 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim27Q62158 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim27Q62158 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim27Q62158 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim27Q62158 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trim27Q62158 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Trim27Q62158 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim27Q62158 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim27Q62158 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim27Q62158 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim27Q62158 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim27Q62158 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim27Q62158 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms