Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Gm28760-201ENSMUST00000185995 736 ntBASIC20.84■□□□□ 0.93
Gli3Q61602 AC238811.3-201ENSMUST00000225422 709 ntBASIC20.84■□□□□ 0.93
Gli3Q61602 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gli3Q61602 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
Gli3Q61602 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Gli3Q61602 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gli3Q61602 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Gli3Q61602 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gli3Q61602 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gli3Q61602 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gli3Q61602 Gm13216-201ENSMUST00000117145 591 ntBASIC20.83■□□□□ 0.92
Gli3Q61602 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gli3Q61602 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gli3Q61602 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gli3Q61602 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Gli3Q61602 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Gli3Q61602 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC20.83■□□□□ 0.92
Gli3Q61602 Gm45841-201ENSMUST00000207700 164 ntBASIC20.83■□□□□ 0.92
Gli3Q61602 AC154171.1-201ENSMUST00000224610 643 ntBASIC20.83■□□□□ 0.92
Gli3Q61602 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gli3Q61602 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gli3Q61602 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gli3Q61602 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gli3Q61602 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Gli3Q61602 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gli3Q61602 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gli3Q61602 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gli3Q61602 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC20.82■□□□□ 0.92
Gli3Q61602 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gli3Q61602 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC20.82■□□□□ 0.92
Gli3Q61602 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC20.82■□□□□ 0.92
Gli3Q61602 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Gli3Q61602 Gm27701-201ENSMUST00000184498 110 ntBASIC20.82■□□□□ 0.92
Gli3Q61602 Gm27892-201ENSMUST00000185017 106 ntBASIC20.82■□□□□ 0.92
Gli3Q61602 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC20.82■□□□□ 0.92
Gli3Q61602 AC160980.1-201ENSMUST00000224136 970 ntBASIC20.82■□□□□ 0.92
Gli3Q61602 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Gli3Q61602 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gli3Q61602 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC20.82■□□□□ 0.92
Gli3Q61602 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gli3Q61602 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gli3Q61602 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gli3Q61602 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gli3Q61602 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gli3Q61602 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gli3Q61602 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gli3Q61602 Gm8839-201ENSMUST00000121279 1645 ntBASIC20.81■□□□□ 0.92
Gli3Q61602 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gli3Q61602 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gli3Q61602 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC20.81■□□□□ 0.92
Gli3Q61602 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Gli3Q61602 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC20.81■□□□□ 0.92
Gli3Q61602 Gm43179-201ENSMUST00000198797 275 ntBASIC20.81■□□□□ 0.92
Gli3Q61602 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gli3Q61602 Gm8399-201ENSMUST00000082300 1117 ntBASIC20.81■□□□□ 0.92
Gli3Q61602 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC20.81■□□□□ 0.92
Gli3Q61602 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gli3Q61602 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gli3Q61602 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gli3Q61602 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Gli3Q61602 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gli3Q61602 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gli3Q61602 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Gli3Q61602 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Gli3Q61602 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC20.8■□□□□ 0.92
Gli3Q61602 Gm8835-201ENSMUST00000173096 1169 ntBASIC20.8■□□□□ 0.92
Gli3Q61602 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Gli3Q61602 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC20.8■□□□□ 0.92
Gli3Q61602 Gm9797-201ENSMUST00000052902 613 ntBASIC20.8■□□□□ 0.92
Gli3Q61602 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gli3Q61602 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gli3Q61602 Gm16401-202ENSMUST00000197463 2074 ntBASIC20.8■□□□□ 0.92
Gli3Q61602 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gli3Q61602 Gm36858-201ENSMUST00000194501 2391 ntBASIC20.8■□□□□ 0.92
Gli3Q61602 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC20.8■□□□□ 0.92
Gli3Q61602 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gli3Q61602 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Gli3Q61602 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gli3Q61602 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC20.8■□□□□ 0.92
Gli3Q61602 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC20.8■□□□□ 0.92
Gli3Q61602 CT009713.10-202ENSMUST00000225734 696 ntBASIC20.8■□□□□ 0.92
Gli3Q61602 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gli3Q61602 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.8■□□□□ 0.92
Gli3Q61602 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gli3Q61602 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gli3Q61602 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gli3Q61602 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gli3Q61602 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gli3Q61602 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gli3Q61602 Gm11661-201ENSMUST00000121761 1327 ntBASIC20.79■□□□□ 0.92
Gli3Q61602 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gli3Q61602 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Gli3Q61602 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gli3Q61602 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gli3Q61602 Gm12329-201ENSMUST00000120829 1007 ntBASIC20.79■□□□□ 0.92
Gli3Q61602 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC20.79■□□□□ 0.92
Gli3Q61602 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC20.79■□□□□ 0.92
Gli3Q61602 Mir6392-201ENSMUST00000184924 108 ntBASIC20.79■□□□□ 0.92
Gli3Q61602 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gli3Q61602 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms