Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ecm1Q61508 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ecm1Q61508 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Ecm1Q61508 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ecm1Q61508 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ecm1Q61508 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ecm1Q61508 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ecm1Q61508 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ecm1Q61508 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ecm1Q61508 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ecm1Q61508 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Ecm1Q61508 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ecm1Q61508 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Ecm1Q61508 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ecm1Q61508 Gm13127-201ENSMUST00000118978 1389 ntBASIC17.2■□□□□ 0.34
Ecm1Q61508 Gm25287-201ENSMUST00000103846 110 ntBASIC17.2■□□□□ 0.34
Ecm1Q61508 Gm22918-201ENSMUST00000103855 110 ntBASIC17.2■□□□□ 0.34
Ecm1Q61508 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ecm1Q61508 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ecm1Q61508 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Ecm1Q61508 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.2■□□□□ 0.34
Ecm1Q61508 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ecm1Q61508 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC17.2■□□□□ 0.34
Ecm1Q61508 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ecm1Q61508 Gm10253-201ENSMUST00000194270 940 ntBASIC17.2■□□□□ 0.34
Ecm1Q61508 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.2■□□□□ 0.34
Ecm1Q61508 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC17.2■□□□□ 0.34
Ecm1Q61508 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Ecm1Q61508 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ecm1Q61508 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ecm1Q61508 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ecm1Q61508 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ecm1Q61508 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ecm1Q61508 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ecm1Q61508 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.2■□□□□ 0.34
Ecm1Q61508 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ecm1Q61508 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ecm1Q61508 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Ecm1Q61508 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.19■□□□□ 0.34
Ecm1Q61508 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ecm1Q61508 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ecm1Q61508 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ecm1Q61508 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ecm1Q61508 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Ecm1Q61508 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ecm1Q61508 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ecm1Q61508 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ecm1Q61508 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ecm1Q61508 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ecm1Q61508 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ecm1Q61508 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ecm1Q61508 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Ecm1Q61508 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Ecm1Q61508 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ecm1Q61508 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ecm1Q61508 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ecm1Q61508 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Ecm1Q61508 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ecm1Q61508 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ecm1Q61508 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Ecm1Q61508 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.18■□□□□ 0.34
Ecm1Q61508 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ecm1Q61508 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Ecm1Q61508 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.18■□□□□ 0.34
Ecm1Q61508 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ecm1Q61508 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.18■□□□□ 0.34
Ecm1Q61508 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ecm1Q61508 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ecm1Q61508 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ecm1Q61508 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ecm1Q61508 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ecm1Q61508 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ecm1Q61508 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.18■□□□□ 0.34
Ecm1Q61508 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ecm1Q61508 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Ecm1Q61508 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ecm1Q61508 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ecm1Q61508 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.17■□□□□ 0.34
Ecm1Q61508 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ecm1Q61508 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ecm1Q61508 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.17■□□□□ 0.34
Ecm1Q61508 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.17■□□□□ 0.34
Ecm1Q61508 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.17■□□□□ 0.34
Ecm1Q61508 Gm24158-201ENSMUST00000175263 71 ntBASIC17.17■□□□□ 0.34
Ecm1Q61508 Gm27430-201ENSMUST00000184585 107 ntBASIC17.17■□□□□ 0.34
Ecm1Q61508 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ecm1Q61508 Gm44333-201ENSMUST00000197168 107 ntBASIC17.17■□□□□ 0.34
Ecm1Q61508 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ecm1Q61508 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ecm1Q61508 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ecm1Q61508 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Ecm1Q61508 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Ecm1Q61508 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ecm1Q61508 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ecm1Q61508 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ecm1Q61508 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ecm1Q61508 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ecm1Q61508 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ecm1Q61508 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ecm1Q61508 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms