Protein–RNA interactions for Protein: Q61451

Cd53, Leukocyte surface antigen CD53, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd53Q61451 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cd53Q61451 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Cd53Q61451 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd53Q61451 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.39□□□□□ -0.11
Cd53Q61451 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd53Q61451 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd53Q61451 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd53Q61451 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd53Q61451 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.39□□□□□ -0.11
Cd53Q61451 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cd53Q61451 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.39□□□□□ -0.11
Cd53Q61451 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cd53Q61451 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd53Q61451 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Cd53Q61451 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.39□□□□□ -0.11
Cd53Q61451 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.39□□□□□ -0.11
Cd53Q61451 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd53Q61451 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.39□□□□□ -0.11
Cd53Q61451 Gm5864-201ENSMUST00000202263 970 ntBASIC14.39□□□□□ -0.11
Cd53Q61451 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd53Q61451 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cd53Q61451 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd53Q61451 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd53Q61451 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd53Q61451 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.39□□□□□ -0.11
Cd53Q61451 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd53Q61451 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd53Q61451 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd53Q61451 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd53Q61451 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.39□□□□□ -0.11
Cd53Q61451 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd53Q61451 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cd53Q61451 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cd53Q61451 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.38□□□□□ -0.11
Cd53Q61451 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd53Q61451 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cd53Q61451 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.38□□□□□ -0.11
Cd53Q61451 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd53Q61451 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.38□□□□□ -0.11
Cd53Q61451 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd53Q61451 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd53Q61451 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cd53Q61451 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd53Q61451 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd53Q61451 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.38□□□□□ -0.11
Cd53Q61451 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.38□□□□□ -0.11
Cd53Q61451 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Cd53Q61451 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd53Q61451 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd53Q61451 Birc2-201ENSMUST00000054878 378 ntBASIC14.38□□□□□ -0.11
Cd53Q61451 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd53Q61451 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd53Q61451 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd53Q61451 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.38□□□□□ -0.11
Cd53Q61451 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd53Q61451 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
Cd53Q61451 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cd53Q61451 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cd53Q61451 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cd53Q61451 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cd53Q61451 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd53Q61451 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd53Q61451 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cd53Q61451 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Cd53Q61451 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.37□□□□□ -0.11
Cd53Q61451 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Cd53Q61451 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd53Q61451 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cd53Q61451 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd53Q61451 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cd53Q61451 BC037039-201ENSMUST00000192003 2205 ntBASIC14.37□□□□□ -0.11
Cd53Q61451 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Cd53Q61451 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd53Q61451 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cd53Q61451 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd53Q61451 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.37□□□□□ -0.11
Cd53Q61451 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.37□□□□□ -0.11
Cd53Q61451 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd53Q61451 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd53Q61451 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd53Q61451 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cd53Q61451 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd53Q61451 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd53Q61451 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd53Q61451 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd53Q61451 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.37□□□□□ -0.11
Cd53Q61451 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd53Q61451 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd53Q61451 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cd53Q61451 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cd53Q61451 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd53Q61451 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cd53Q61451 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cd53Q61451 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd53Q61451 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd53Q61451 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd53Q61451 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cd53Q61451 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.36□□□□□ -0.11
Cd53Q61451 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd53Q61451 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms