Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Gm10499-201ENSMUST00000174094 934 ntBASIC17.9■□□□□ 0.46
Scnn1aQ61180 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Scnn1aQ61180 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scnn1aQ61180 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Scnn1aQ61180 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scnn1aQ61180 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scnn1aQ61180 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.9■□□□□ 0.46
Scnn1aQ61180 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scnn1aQ61180 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.9■□□□□ 0.46
Scnn1aQ61180 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scnn1aQ61180 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Scnn1aQ61180 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Scnn1aQ61180 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Scnn1aQ61180 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Scnn1aQ61180 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.46
Scnn1aQ61180 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scnn1aQ61180 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scnn1aQ61180 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.89■□□□□ 0.45
Scnn1aQ61180 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Scnn1aQ61180 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.89■□□□□ 0.45
Scnn1aQ61180 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.89■□□□□ 0.45
Scnn1aQ61180 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.89■□□□□ 0.45
Scnn1aQ61180 Thap2-203ENSMUST00000218989 527 ntBASIC17.89■□□□□ 0.45
Scnn1aQ61180 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scnn1aQ61180 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scnn1aQ61180 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scnn1aQ61180 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Scnn1aQ61180 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scnn1aQ61180 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Scnn1aQ61180 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Scnn1aQ61180 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scnn1aQ61180 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scnn1aQ61180 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scnn1aQ61180 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Scnn1aQ61180 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Scnn1aQ61180 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scnn1aQ61180 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.89■□□□□ 0.45
Scnn1aQ61180 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.89■□□□□ 0.45
Scnn1aQ61180 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scnn1aQ61180 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scnn1aQ61180 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Scnn1aQ61180 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scnn1aQ61180 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scnn1aQ61180 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Scnn1aQ61180 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scnn1aQ61180 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scnn1aQ61180 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scnn1aQ61180 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Scnn1aQ61180 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Scnn1aQ61180 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scnn1aQ61180 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scnn1aQ61180 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Scnn1aQ61180 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Scnn1aQ61180 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scnn1aQ61180 Gm27301-201ENSMUST00000184012 127 ntBASIC17.88■□□□□ 0.45
Scnn1aQ61180 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Scnn1aQ61180 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Scnn1aQ61180 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scnn1aQ61180 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scnn1aQ61180 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scnn1aQ61180 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Scnn1aQ61180 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scnn1aQ61180 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Scnn1aQ61180 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scnn1aQ61180 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scnn1aQ61180 Gm15427-201ENSMUST00000117288 531 ntBASIC17.87■□□□□ 0.45
Scnn1aQ61180 Gm12008-201ENSMUST00000117791 755 ntBASIC17.87■□□□□ 0.45
Scnn1aQ61180 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.87■□□□□ 0.45
Scnn1aQ61180 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.87■□□□□ 0.45
Scnn1aQ61180 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Scnn1aQ61180 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scnn1aQ61180 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC17.87■□□□□ 0.45
Scnn1aQ61180 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Scnn1aQ61180 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.87■□□□□ 0.45
Scnn1aQ61180 Chchd1-203ENSMUST00000224633 557 ntBASIC17.87■□□□□ 0.45
Scnn1aQ61180 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scnn1aQ61180 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Scnn1aQ61180 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.87■□□□□ 0.45
Scnn1aQ61180 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Scnn1aQ61180 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Scnn1aQ61180 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scnn1aQ61180 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scnn1aQ61180 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scnn1aQ61180 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scnn1aQ61180 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.86■□□□□ 0.45
Scnn1aQ61180 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.86■□□□□ 0.45
Scnn1aQ61180 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.86■□□□□ 0.45
Scnn1aQ61180 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Scnn1aQ61180 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.86■□□□□ 0.45
Scnn1aQ61180 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.86■□□□□ 0.45
Scnn1aQ61180 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.86■□□□□ 0.45
Scnn1aQ61180 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.86■□□□□ 0.45
Scnn1aQ61180 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scnn1aQ61180 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scnn1aQ61180 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scnn1aQ61180 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scnn1aQ61180 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.86■□□□□ 0.45
Scnn1aQ61180 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.86■□□□□ 0.45
Scnn1aQ61180 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.86■□□□□ 0.45
Scnn1aQ61180 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms