Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Usf1Q61069 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.16□□□□□ -0.14
Usf1Q61069 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.16□□□□□ -0.14
Usf1Q61069 Gm25349-201ENSMUST00000177728 110 ntBASIC14.16□□□□□ -0.14
Usf1Q61069 Gm23616-201ENSMUST00000177797 110 ntBASIC14.16□□□□□ -0.14
Usf1Q61069 Gm25871-201ENSMUST00000177816 110 ntBASIC14.16□□□□□ -0.14
Usf1Q61069 Gm24752-201ENSMUST00000178240 110 ntBASIC14.16□□□□□ -0.14
Usf1Q61069 Gm24496-201ENSMUST00000178287 110 ntBASIC14.16□□□□□ -0.14
Usf1Q61069 Gm25649-201ENSMUST00000178476 110 ntBASIC14.16□□□□□ -0.14
Usf1Q61069 Gm25548-201ENSMUST00000178681 110 ntBASIC14.16□□□□□ -0.14
Usf1Q61069 Gm23147-201ENSMUST00000178841 110 ntBASIC14.16□□□□□ -0.14
Usf1Q61069 Gm26095-201ENSMUST00000179270 110 ntBASIC14.16□□□□□ -0.14
Usf1Q61069 Gm22171-201ENSMUST00000179283 110 ntBASIC14.16□□□□□ -0.14
Usf1Q61069 Gm23936-201ENSMUST00000179354 110 ntBASIC14.16□□□□□ -0.14
Usf1Q61069 Gm22619-201ENSMUST00000179516 110 ntBASIC14.16□□□□□ -0.14
Usf1Q61069 Gm25255-201ENSMUST00000179579 110 ntBASIC14.16□□□□□ -0.14
Usf1Q61069 Gm24755-201ENSMUST00000179691 110 ntBASIC14.16□□□□□ -0.14
Usf1Q61069 Gm26506-201ENSMUST00000179692 110 ntBASIC14.16□□□□□ -0.14
Usf1Q61069 Gm25086-201ENSMUST00000179931 110 ntBASIC14.16□□□□□ -0.14
Usf1Q61069 Gm23243-201ENSMUST00000180047 110 ntBASIC14.16□□□□□ -0.14
Usf1Q61069 Gm24659-201ENSMUST00000180212 110 ntBASIC14.16□□□□□ -0.14
Usf1Q61069 Gm24169-201ENSMUST00000180244 110 ntBASIC14.16□□□□□ -0.14
Usf1Q61069 Gm23689-201ENSMUST00000180354 110 ntBASIC14.16□□□□□ -0.14
Usf1Q61069 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usf1Q61069 Gm27359-201ENSMUST00000184153 110 ntBASIC14.16□□□□□ -0.14
Usf1Q61069 Gm27785-201ENSMUST00000184268 110 ntBASIC14.16□□□□□ -0.14
Usf1Q61069 Gm27466-201ENSMUST00000184396 110 ntBASIC14.16□□□□□ -0.14
Usf1Q61069 Gm27703-201ENSMUST00000184836 110 ntBASIC14.16□□□□□ -0.14
Usf1Q61069 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.16□□□□□ -0.14
Usf1Q61069 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usf1Q61069 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usf1Q61069 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usf1Q61069 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usf1Q61069 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usf1Q61069 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usf1Q61069 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usf1Q61069 Grk6-207ENSMUST00000225925 2769 ntBASIC14.16□□□□□ -0.14
Usf1Q61069 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.15□□□□□ -0.14
Usf1Q61069 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usf1Q61069 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usf1Q61069 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usf1Q61069 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usf1Q61069 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usf1Q61069 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usf1Q61069 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usf1Q61069 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.15□□□□□ -0.14
Usf1Q61069 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usf1Q61069 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.15□□□□□ -0.14
Usf1Q61069 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.15□□□□□ -0.14
Usf1Q61069 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usf1Q61069 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.15□□□□□ -0.14
Usf1Q61069 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usf1Q61069 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.15□□□□□ -0.14
Usf1Q61069 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.15□□□□□ -0.14
Usf1Q61069 Gm23547-201ENSMUST00000158210 271 ntBASIC14.15□□□□□ -0.14
Usf1Q61069 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.15□□□□□ -0.14
Usf1Q61069 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usf1Q61069 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.15□□□□□ -0.14
Usf1Q61069 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.15□□□□□ -0.14
Usf1Q61069 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usf1Q61069 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usf1Q61069 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usf1Q61069 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usf1Q61069 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usf1Q61069 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Usf1Q61069 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Usf1Q61069 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usf1Q61069 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.15□□□□□ -0.15
Usf1Q61069 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Usf1Q61069 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usf1Q61069 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Usf1Q61069 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Usf1Q61069 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.14□□□□□ -0.15
Usf1Q61069 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usf1Q61069 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usf1Q61069 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usf1Q61069 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usf1Q61069 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usf1Q61069 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Usf1Q61069 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Usf1Q61069 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.14□□□□□ -0.15
Usf1Q61069 Gm43438-201ENSMUST00000198133 379 ntBASIC14.14□□□□□ -0.15
Usf1Q61069 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.14□□□□□ -0.15
Usf1Q61069 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.14□□□□□ -0.15
Usf1Q61069 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usf1Q61069 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usf1Q61069 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usf1Q61069 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usf1Q61069 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usf1Q61069 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Usf1Q61069 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usf1Q61069 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usf1Q61069 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usf1Q61069 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usf1Q61069 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usf1Q61069 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.14□□□□□ -0.15
Usf1Q61069 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Usf1Q61069 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Usf1Q61069 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.14□□□□□ -0.15
Usf1Q61069 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms