Protein–RNA interactions for Protein: Q60793

Klf4, Krueppel-like factor 4, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Klf4Q60793 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Klf4Q60793 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Klf4Q60793 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Klf4Q60793 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Klf4Q60793 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.69□□□□□ -0.06
Klf4Q60793 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Klf4Q60793 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Klf4Q60793 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Klf4Q60793 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Klf4Q60793 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.69□□□□□ -0.06
Klf4Q60793 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Klf4Q60793 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Klf4Q60793 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Klf4Q60793 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Klf4Q60793 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.68□□□□□ -0.06
Klf4Q60793 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.68□□□□□ -0.06
Klf4Q60793 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Klf4Q60793 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Klf4Q60793 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Klf4Q60793 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Klf4Q60793 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Klf4Q60793 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Klf4Q60793 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Klf4Q60793 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Klf4Q60793 Gm15165-201ENSMUST00000118140 502 ntBASIC14.68□□□□□ -0.06
Klf4Q60793 Gm8344-201ENSMUST00000119813 856 ntBASIC14.68□□□□□ -0.06
Klf4Q60793 Gm12497-201ENSMUST00000138778 237 ntBASIC14.68□□□□□ -0.06
Klf4Q60793 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.68□□□□□ -0.06
Klf4Q60793 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.68□□□□□ -0.06
Klf4Q60793 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Klf4Q60793 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Klf4Q60793 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.68□□□□□ -0.06
Klf4Q60793 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.68□□□□□ -0.06
Klf4Q60793 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Klf4Q60793 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Klf4Q60793 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Klf4Q60793 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Klf4Q60793 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Klf4Q60793 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Klf4Q60793 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Klf4Q60793 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.68□□□□□ -0.06
Klf4Q60793 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Klf4Q60793 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Klf4Q60793 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Klf4Q60793 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Klf4Q60793 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Klf4Q60793 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
Klf4Q60793 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Klf4Q60793 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Klf4Q60793 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Klf4Q60793 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Klf4Q60793 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Klf4Q60793 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Klf4Q60793 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Klf4Q60793 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Klf4Q60793 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Klf4Q60793 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Klf4Q60793 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Klf4Q60793 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Klf4Q60793 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Klf4Q60793 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Klf4Q60793 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Klf4Q60793 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Klf4Q60793 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.67□□□□□ -0.06
Klf4Q60793 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Klf4Q60793 Gm18622-201ENSMUST00000219361 595 ntBASIC14.67□□□□□ -0.06
Klf4Q60793 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Klf4Q60793 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Klf4Q60793 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Klf4Q60793 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Klf4Q60793 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Klf4Q60793 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Klf4Q60793 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Klf4Q60793 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Klf4Q60793 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Klf4Q60793 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Klf4Q60793 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Klf4Q60793 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Klf4Q60793 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Klf4Q60793 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Klf4Q60793 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Klf4Q60793 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Klf4Q60793 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Klf4Q60793 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Klf4Q60793 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.66□□□□□ -0.06
Klf4Q60793 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.66□□□□□ -0.06
Klf4Q60793 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Klf4Q60793 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.66□□□□□ -0.06
Klf4Q60793 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Klf4Q60793 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Klf4Q60793 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Klf4Q60793 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Klf4Q60793 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Klf4Q60793 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Klf4Q60793 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Klf4Q60793 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Klf4Q60793 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Klf4Q60793 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Klf4Q60793 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Klf4Q60793 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms