Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.81■□□□□ 0.44
Ccdc88aQ5SNZ0 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.81■□□□□ 0.44
Ccdc88aQ5SNZ0 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc88aQ5SNZ0 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC17.81■□□□□ 0.44
Ccdc88aQ5SNZ0 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.81■□□□□ 0.44
Ccdc88aQ5SNZ0 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc88aQ5SNZ0 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc88aQ5SNZ0 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc88aQ5SNZ0 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc88aQ5SNZ0 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc88aQ5SNZ0 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ccdc88aQ5SNZ0 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc88aQ5SNZ0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc88aQ5SNZ0 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.8■□□□□ 0.44
Ccdc88aQ5SNZ0 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc88aQ5SNZ0 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.8■□□□□ 0.44
Ccdc88aQ5SNZ0 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC17.8■□□□□ 0.44
Ccdc88aQ5SNZ0 Gm18489-201ENSMUST00000172565 551 ntBASIC17.8■□□□□ 0.44
Ccdc88aQ5SNZ0 Gm27301-201ENSMUST00000184012 127 ntBASIC17.8■□□□□ 0.44
Ccdc88aQ5SNZ0 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.8■□□□□ 0.44
Ccdc88aQ5SNZ0 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC17.8■□□□□ 0.44
Ccdc88aQ5SNZ0 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC17.8■□□□□ 0.44
Ccdc88aQ5SNZ0 AC140397.2-201ENSMUST00000224213 834 ntBASIC17.8■□□□□ 0.44
Ccdc88aQ5SNZ0 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Ccdc88aQ5SNZ0 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc88aQ5SNZ0 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.8■□□□□ 0.44
Ccdc88aQ5SNZ0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc88aQ5SNZ0 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc88aQ5SNZ0 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ccdc88aQ5SNZ0 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc88aQ5SNZ0 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc88aQ5SNZ0 Gm5366-201ENSMUST00000215494 1338 ntBASIC17.8■□□□□ 0.44
Ccdc88aQ5SNZ0 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc88aQ5SNZ0 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc88aQ5SNZ0 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.8■□□□□ 0.44
Ccdc88aQ5SNZ0 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc88aQ5SNZ0 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc88aQ5SNZ0 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc88aQ5SNZ0 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Ccdc88aQ5SNZ0 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc88aQ5SNZ0 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.79■□□□□ 0.44
Ccdc88aQ5SNZ0 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc88aQ5SNZ0 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc88aQ5SNZ0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Ccdc88aQ5SNZ0 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc88aQ5SNZ0 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Ccdc88aQ5SNZ0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc88aQ5SNZ0 Gm13365-201ENSMUST00000121188 973 ntBASIC17.79■□□□□ 0.44
Ccdc88aQ5SNZ0 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc88aQ5SNZ0 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc88aQ5SNZ0 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Ccdc88aQ5SNZ0 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC17.79■□□□□ 0.44
Ccdc88aQ5SNZ0 Dancr-204ENSMUST00000132389 2347 ntBASIC17.79■□□□□ 0.44
Ccdc88aQ5SNZ0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc88aQ5SNZ0 CT025626.1-201ENSMUST00000223735 1455 ntBASIC17.79■□□□□ 0.44
Ccdc88aQ5SNZ0 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc88aQ5SNZ0 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc88aQ5SNZ0 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc88aQ5SNZ0 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc88aQ5SNZ0 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc88aQ5SNZ0 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.78■□□□□ 0.44
Ccdc88aQ5SNZ0 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.78■□□□□ 0.44
Ccdc88aQ5SNZ0 Rprl2-201ENSMUST00000157150 290 ntBASIC17.78■□□□□ 0.44
Ccdc88aQ5SNZ0 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc88aQ5SNZ0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc88aQ5SNZ0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc88aQ5SNZ0 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc88aQ5SNZ0 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc88aQ5SNZ0 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc88aQ5SNZ0 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc88aQ5SNZ0 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Ccdc88aQ5SNZ0 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc88aQ5SNZ0 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc88aQ5SNZ0 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc88aQ5SNZ0 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.78■□□□□ 0.44
Ccdc88aQ5SNZ0 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.78■□□□□ 0.44
Ccdc88aQ5SNZ0 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc88aQ5SNZ0 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.78■□□□□ 0.44
Ccdc88aQ5SNZ0 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc88aQ5SNZ0 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc88aQ5SNZ0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc88aQ5SNZ0 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc88aQ5SNZ0 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc88aQ5SNZ0 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc88aQ5SNZ0 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc88aQ5SNZ0 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc88aQ5SNZ0 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Ccdc88aQ5SNZ0 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc88aQ5SNZ0 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc88aQ5SNZ0 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.77■□□□□ 0.44
Ccdc88aQ5SNZ0 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc88aQ5SNZ0 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc88aQ5SNZ0 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc88aQ5SNZ0 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc88aQ5SNZ0 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc88aQ5SNZ0 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc88aQ5SNZ0 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc88aQ5SNZ0 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc88aQ5SNZ0 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.77■□□□□ 0.44
Ccdc88aQ5SNZ0 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms