Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-3Q5R1E6 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-3Q5R1E6 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.53□□□□□ -0.4
Trav6-3Q5R1E6 Gm17808-201ENSMUST00000200859 894 ntBASIC12.53□□□□□ -0.4
Trav6-3Q5R1E6 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav6-3Q5R1E6 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-3Q5R1E6 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-3Q5R1E6 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.53□□□□□ -0.4
Trav6-3Q5R1E6 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.53□□□□□ -0.4
Trav6-3Q5R1E6 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav6-3Q5R1E6 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav6-3Q5R1E6 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-3Q5R1E6 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-3Q5R1E6 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav6-3Q5R1E6 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-3Q5R1E6 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-3Q5R1E6 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-3Q5R1E6 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-3Q5R1E6 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-3Q5R1E6 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-3Q5R1E6 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-3Q5R1E6 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-3Q5R1E6 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav6-3Q5R1E6 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-3Q5R1E6 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-3Q5R1E6 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Trav6-3Q5R1E6 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-3Q5R1E6 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-3Q5R1E6 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6-3Q5R1E6 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6-3Q5R1E6 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6-3Q5R1E6 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6-3Q5R1E6 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6-3Q5R1E6 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6-3Q5R1E6 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6-3Q5R1E6 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Trav6-3Q5R1E6 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trav6-3Q5R1E6 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-3Q5R1E6 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav6-3Q5R1E6 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-3Q5R1E6 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.52□□□□□ -0.41
Trav6-3Q5R1E6 Gm15794-201ENSMUST00000120182 631 ntBASIC12.52□□□□□ -0.41
Trav6-3Q5R1E6 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Trav6-3Q5R1E6 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-3Q5R1E6 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-3Q5R1E6 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-3Q5R1E6 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-3Q5R1E6 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-3Q5R1E6 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-3Q5R1E6 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-3Q5R1E6 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-3Q5R1E6 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-3Q5R1E6 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.52□□□□□ -0.41
Trav6-3Q5R1E6 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-3Q5R1E6 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-3Q5R1E6 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-3Q5R1E6 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Trav6-3Q5R1E6 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-3Q5R1E6 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-3Q5R1E6 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-3Q5R1E6 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-3Q5R1E6 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-3Q5R1E6 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-3Q5R1E6 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-3Q5R1E6 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-3Q5R1E6 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-3Q5R1E6 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-3Q5R1E6 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-3Q5R1E6 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav6-3Q5R1E6 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Trav6-3Q5R1E6 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.51□□□□□ -0.41
Trav6-3Q5R1E6 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.51□□□□□ -0.41
Trav6-3Q5R1E6 Gm29518-201ENSMUST00000190858 372 ntBASIC12.51□□□□□ -0.41
Trav6-3Q5R1E6 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav6-3Q5R1E6 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-3Q5R1E6 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-3Q5R1E6 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-3Q5R1E6 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-3Q5R1E6 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-3Q5R1E6 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-3Q5R1E6 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-3Q5R1E6 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-3Q5R1E6 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.51□□□□□ -0.41
Trav6-3Q5R1E6 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-3Q5R1E6 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-3Q5R1E6 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-3Q5R1E6 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-3Q5R1E6 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav6-3Q5R1E6 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-3Q5R1E6 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-3Q5R1E6 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-3Q5R1E6 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-3Q5R1E6 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-3Q5R1E6 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-3Q5R1E6 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-3Q5R1E6 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-3Q5R1E6 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-3Q5R1E6 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-3Q5R1E6 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-3Q5R1E6 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms