Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 Gm29310-201ENSMUST00000185468 696 ntBASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 Gm21825-201ENSMUST00000185728 696 ntBASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 Gm29109-201ENSMUST00000185895 696 ntBASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 Gm21896-201ENSMUST00000186520 696 ntBASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 Gm21873-201ENSMUST00000186728 696 ntBASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 Gm21794-201ENSMUST00000187056 696 ntBASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 Gm21880-201ENSMUST00000187275 696 ntBASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 Gm21826-201ENSMUST00000187451 696 ntBASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 Gm21198-201ENSMUST00000188393 696 ntBASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 Gm21749-201ENSMUST00000189343 696 ntBASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 Gm21901-201ENSMUST00000189568 696 ntBASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 Gm29424-201ENSMUST00000189716 696 ntBASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 Gm28599-201ENSMUST00000189838 694 ntBASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 Gm21867-201ENSMUST00000189917 696 ntBASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 Gm29269-201ENSMUST00000190087 696 ntBASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 Gm21722-201ENSMUST00000190153 696 ntBASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 Gm28423-201ENSMUST00000190701 696 ntBASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 Gm21899-201ENSMUST00000190745 696 ntBASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 Gm21910-201ENSMUST00000191163 696 ntBASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 Gm21849-201ENSMUST00000191571 696 ntBASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 Gm28678-201ENSMUST00000191593 696 ntBASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 Gm20910-201ENSMUST00000193268 696 ntBASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 Gm21871-201ENSMUST00000194621 696 ntBASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Col27a1Q5QNQ9 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.87□□□□□ -0.03
Col27a1Q5QNQ9 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col27a1Q5QNQ9 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.87□□□□□ -0.03
Col27a1Q5QNQ9 Gm11918-201ENSMUST00000121660 179 ntBASIC14.87□□□□□ -0.03
Col27a1Q5QNQ9 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.87□□□□□ -0.03
Col27a1Q5QNQ9 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col27a1Q5QNQ9 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.87□□□□□ -0.03
Col27a1Q5QNQ9 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col27a1Q5QNQ9 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Col27a1Q5QNQ9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col27a1Q5QNQ9 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col27a1Q5QNQ9 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.87□□□□□ -0.03
Col27a1Q5QNQ9 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.87□□□□□ -0.03
Col27a1Q5QNQ9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col27a1Q5QNQ9 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col27a1Q5QNQ9 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.87□□□□□ -0.03
Col27a1Q5QNQ9 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col27a1Q5QNQ9 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col27a1Q5QNQ9 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Col27a1Q5QNQ9 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col27a1Q5QNQ9 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col27a1Q5QNQ9 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.87□□□□□ -0.03
Col27a1Q5QNQ9 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.87□□□□□ -0.03
Col27a1Q5QNQ9 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col27a1Q5QNQ9 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.87□□□□□ -0.03
Col27a1Q5QNQ9 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col27a1Q5QNQ9 Gm20445-201ENSMUST00000061905 565 ntBASIC14.87□□□□□ -0.03
Col27a1Q5QNQ9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Col27a1Q5QNQ9 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col27a1Q5QNQ9 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col27a1Q5QNQ9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Col27a1Q5QNQ9 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Col27a1Q5QNQ9 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col27a1Q5QNQ9 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col27a1Q5QNQ9 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col27a1Q5QNQ9 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col27a1Q5QNQ9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Col27a1Q5QNQ9 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col27a1Q5QNQ9 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col27a1Q5QNQ9 Gm17150-201ENSMUST00000165577 381 ntBASIC14.86□□□□□ -0.03
Col27a1Q5QNQ9 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Col27a1Q5QNQ9 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col27a1Q5QNQ9 Gm21854-201ENSMUST00000179901 471 ntBASIC14.86□□□□□ -0.03
Col27a1Q5QNQ9 Gm9522-201ENSMUST00000182394 926 ntBASIC14.86□□□□□ -0.03
Col27a1Q5QNQ9 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Col27a1Q5QNQ9 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.86□□□□□ -0.03
Col27a1Q5QNQ9 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col27a1Q5QNQ9 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col27a1Q5QNQ9 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.86□□□□□ -0.03
Col27a1Q5QNQ9 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.86□□□□□ -0.03
Col27a1Q5QNQ9 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col27a1Q5QNQ9 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col27a1Q5QNQ9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col27a1Q5QNQ9 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col27a1Q5QNQ9 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.86□□□□□ -0.03
Col27a1Q5QNQ9 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Col27a1Q5QNQ9 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col27a1Q5QNQ9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col27a1Q5QNQ9 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col27a1Q5QNQ9 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col27a1Q5QNQ9 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms