Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trim80Q3V061 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim80Q3V061 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim80Q3V061 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim80Q3V061 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim80Q3V061 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim80Q3V061 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim80Q3V061 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim80Q3V061 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim80Q3V061 Gm9731-201ENSMUST00000209480 747 ntBASIC16.16■□□□□ 0.18
Trim80Q3V061 Gm7370-201ENSMUST00000219471 767 ntBASIC16.16■□□□□ 0.18
Trim80Q3V061 Il3ra-202ENSMUST00000223589 738 ntBASIC16.16■□□□□ 0.18
Trim80Q3V061 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Trim80Q3V061 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim80Q3V061 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim80Q3V061 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim80Q3V061 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim80Q3V061 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim80Q3V061 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim80Q3V061 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim80Q3V061 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trim80Q3V061 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim80Q3V061 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim80Q3V061 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim80Q3V061 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim80Q3V061 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim80Q3V061 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trim80Q3V061 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim80Q3V061 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trim80Q3V061 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim80Q3V061 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim80Q3V061 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim80Q3V061 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trim80Q3V061 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim80Q3V061 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim80Q3V061 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.15■□□□□ 0.18
Trim80Q3V061 Gm29518-201ENSMUST00000190858 372 ntBASIC16.15■□□□□ 0.18
Trim80Q3V061 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim80Q3V061 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim80Q3V061 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim80Q3V061 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim80Q3V061 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim80Q3V061 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim80Q3V061 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.15■□□□□ 0.18
Trim80Q3V061 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim80Q3V061 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim80Q3V061 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim80Q3V061 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Trim80Q3V061 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim80Q3V061 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
Trim80Q3V061 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim80Q3V061 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim80Q3V061 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim80Q3V061 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim80Q3V061 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim80Q3V061 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim80Q3V061 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim80Q3V061 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim80Q3V061 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.14■□□□□ 0.17
Trim80Q3V061 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim80Q3V061 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.14■□□□□ 0.17
Trim80Q3V061 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.14■□□□□ 0.17
Trim80Q3V061 Gm17807-201ENSMUST00000186869 298 ntBASIC16.14■□□□□ 0.17
Trim80Q3V061 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.14■□□□□ 0.17
Trim80Q3V061 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trim80Q3V061 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim80Q3V061 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim80Q3V061 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim80Q3V061 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim80Q3V061 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim80Q3V061 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim80Q3V061 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trim80Q3V061 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim80Q3V061 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim80Q3V061 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim80Q3V061 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim80Q3V061 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim80Q3V061 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim80Q3V061 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim80Q3V061 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim80Q3V061 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trim80Q3V061 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trim80Q3V061 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.13■□□□□ 0.17
Trim80Q3V061 Gm11355-201ENSMUST00000121120 306 ntBASIC16.13■□□□□ 0.17
Trim80Q3V061 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim80Q3V061 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim80Q3V061 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim80Q3V061 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trim80Q3V061 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim80Q3V061 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim80Q3V061 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim80Q3V061 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim80Q3V061 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim80Q3V061 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trim80Q3V061 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim80Q3V061 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim80Q3V061 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim80Q3V061 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Trim80Q3V061 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim80Q3V061 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms