Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf223Q3UV31 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf223Q3UV31 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.11■□□□□ 0.01
Rnf223Q3UV31 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf223Q3UV31 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf223Q3UV31 Gm4995-201ENSMUST00000117247 432 ntBASIC15.11■□□□□ 0.01
Rnf223Q3UV31 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.11■□□□□ 0.01
Rnf223Q3UV31 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.11■□□□□ 0.01
Rnf223Q3UV31 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf223Q3UV31 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf223Q3UV31 Gm5867-201ENSMUST00000063197 592 ntBASIC15.11■□□□□ 0.01
Rnf223Q3UV31 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf223Q3UV31 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf223Q3UV31 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rnf223Q3UV31 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf223Q3UV31 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf223Q3UV31 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf223Q3UV31 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf223Q3UV31 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf223Q3UV31 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf223Q3UV31 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf223Q3UV31 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf223Q3UV31 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf223Q3UV31 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf223Q3UV31 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf223Q3UV31 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf223Q3UV31 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf223Q3UV31 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rnf223Q3UV31 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.1■□□□□ 0.01
Rnf223Q3UV31 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf223Q3UV31 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.1■□□□□ 0.01
Rnf223Q3UV31 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.1■□□□□ 0.01
Rnf223Q3UV31 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf223Q3UV31 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf223Q3UV31 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf223Q3UV31 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf223Q3UV31 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf223Q3UV31 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rnf223Q3UV31 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf223Q3UV31 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf223Q3UV31 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.1■□□□□ 0.01
Rnf223Q3UV31 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf223Q3UV31 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf223Q3UV31 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rnf223Q3UV31 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf223Q3UV31 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf223Q3UV31 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf223Q3UV31 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf223Q3UV31 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Rnf223Q3UV31 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf223Q3UV31 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf223Q3UV31 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf223Q3UV31 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf223Q3UV31 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf223Q3UV31 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf223Q3UV31 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf223Q3UV31 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf223Q3UV31 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf223Q3UV31 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf223Q3UV31 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Rnf223Q3UV31 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf223Q3UV31 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rnf223Q3UV31 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.09■□□□□ 0.01
Rnf223Q3UV31 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf223Q3UV31 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.09■□□□□ 0.01
Rnf223Q3UV31 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.09■□□□□ 0.01
Rnf223Q3UV31 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.09■□□□□ 0.01
Rnf223Q3UV31 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.09■□□□□ 0.01
Rnf223Q3UV31 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf223Q3UV31 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf223Q3UV31 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf223Q3UV31 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf223Q3UV31 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.09■□□□□ 0.01
Rnf223Q3UV31 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf223Q3UV31 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf223Q3UV31 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf223Q3UV31 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Rnf223Q3UV31 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Rnf223Q3UV31 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rnf223Q3UV31 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rnf223Q3UV31 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Rnf223Q3UV31 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf223Q3UV31 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.08■□□□□ 0
Rnf223Q3UV31 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf223Q3UV31 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rnf223Q3UV31 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.08■□□□□ 0
Rnf223Q3UV31 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf223Q3UV31 Gm13597-201ENSMUST00000121239 375 ntBASIC15.08■□□□□ 0
Rnf223Q3UV31 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rnf223Q3UV31 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf223Q3UV31 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.08■□□□□ 0
Rnf223Q3UV31 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.08■□□□□ 0
Rnf223Q3UV31 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.08■□□□□ 0
Rnf223Q3UV31 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf223Q3UV31 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf223Q3UV31 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
Rnf223Q3UV31 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.08■□□□□ 0
Rnf223Q3UV31 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Rnf223Q3UV31 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf223Q3UV31 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms