Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.28□□□□□ -0.12
Spg11Q3UHA3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Spg11Q3UHA3 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.27□□□□□ -0.12
Spg11Q3UHA3 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.27□□□□□ -0.12
Spg11Q3UHA3 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Spg11Q3UHA3 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.27□□□□□ -0.12
Spg11Q3UHA3 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Spg11Q3UHA3 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.27□□□□□ -0.12
Spg11Q3UHA3 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Spg11Q3UHA3 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Spg11Q3UHA3 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Spg11Q3UHA3 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Spg11Q3UHA3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Spg11Q3UHA3 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Spg11Q3UHA3 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Spg11Q3UHA3 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.27□□□□□ -0.13
Spg11Q3UHA3 Gm37917-201ENSMUST00000194711 392 ntBASIC14.27□□□□□ -0.13
Spg11Q3UHA3 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Spg11Q3UHA3 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Spg11Q3UHA3 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Spg11Q3UHA3 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Spg11Q3UHA3 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Spg11Q3UHA3 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Spg11Q3UHA3 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Spg11Q3UHA3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Spg11Q3UHA3 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Spg11Q3UHA3 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Spg11Q3UHA3 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.26□□□□□ -0.13
Spg11Q3UHA3 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Spg11Q3UHA3 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Spg11Q3UHA3 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Spg11Q3UHA3 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Spg11Q3UHA3 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Spg11Q3UHA3 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Spg11Q3UHA3 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Spg11Q3UHA3 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Spg11Q3UHA3 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Spg11Q3UHA3 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.26□□□□□ -0.13
Spg11Q3UHA3 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Spg11Q3UHA3 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Spg11Q3UHA3 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.26□□□□□ -0.13
Spg11Q3UHA3 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Spg11Q3UHA3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Spg11Q3UHA3 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.26□□□□□ -0.13
Spg11Q3UHA3 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Spg11Q3UHA3 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Spg11Q3UHA3 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Spg11Q3UHA3 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Spg11Q3UHA3 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.26□□□□□ -0.13
Spg11Q3UHA3 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Spg11Q3UHA3 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Spg11Q3UHA3 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Spg11Q3UHA3 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Spg11Q3UHA3 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.26□□□□□ -0.13
Spg11Q3UHA3 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Spg11Q3UHA3 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Spg11Q3UHA3 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.25□□□□□ -0.13
Spg11Q3UHA3 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Spg11Q3UHA3 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.25□□□□□ -0.13
Spg11Q3UHA3 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.25□□□□□ -0.13
Spg11Q3UHA3 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.25□□□□□ -0.13
Spg11Q3UHA3 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC14.25□□□□□ -0.13
Spg11Q3UHA3 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Spg11Q3UHA3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.25□□□□□ -0.13
Spg11Q3UHA3 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Spg11Q3UHA3 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Spg11Q3UHA3 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Spg11Q3UHA3 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Spg11Q3UHA3 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Spg11Q3UHA3 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Spg11Q3UHA3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Spg11Q3UHA3 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Spg11Q3UHA3 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Spg11Q3UHA3 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Spg11Q3UHA3 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Spg11Q3UHA3 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Spg11Q3UHA3 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Spg11Q3UHA3 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC14.25□□□□□ -0.13
Spg11Q3UHA3 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.25□□□□□ -0.13
Spg11Q3UHA3 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Spg11Q3UHA3 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Spg11Q3UHA3 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Spg11Q3UHA3 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Spg11Q3UHA3 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Spg11Q3UHA3 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Spg11Q3UHA3 Gm6627-201ENSMUST00000218299 2386 ntBASIC14.25□□□□□ -0.13
Spg11Q3UHA3 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Spg11Q3UHA3 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Spg11Q3UHA3 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Spg11Q3UHA3 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Spg11Q3UHA3 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.24□□□□□ -0.13
Spg11Q3UHA3 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Spg11Q3UHA3 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Spg11Q3UHA3 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Spg11Q3UHA3 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Spg11Q3UHA3 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Spg11Q3UHA3 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Spg11Q3UHA3 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Spg11Q3UHA3 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Spg11Q3UHA3 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms