Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Brf2Q3UAW9 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Brf2Q3UAW9 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.71□□□□□ -0.05
Brf2Q3UAW9 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.71□□□□□ -0.05
Brf2Q3UAW9 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.71□□□□□ -0.05
Brf2Q3UAW9 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.71□□□□□ -0.05
Brf2Q3UAW9 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.71□□□□□ -0.05
Brf2Q3UAW9 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.71□□□□□ -0.05
Brf2Q3UAW9 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Brf2Q3UAW9 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.71□□□□□ -0.05
Brf2Q3UAW9 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.71□□□□□ -0.05
Brf2Q3UAW9 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.71□□□□□ -0.05
Brf2Q3UAW9 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.71□□□□□ -0.05
Brf2Q3UAW9 Gm8825-201ENSMUST00000182565 998 ntBASIC14.71□□□□□ -0.05
Brf2Q3UAW9 Gm4518-201ENSMUST00000182638 718 ntBASIC14.71□□□□□ -0.05
Brf2Q3UAW9 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.71□□□□□ -0.05
Brf2Q3UAW9 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.71□□□□□ -0.05
Brf2Q3UAW9 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.71□□□□□ -0.05
Brf2Q3UAW9 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Brf2Q3UAW9 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Brf2Q3UAW9 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Brf2Q3UAW9 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Brf2Q3UAW9 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Brf2Q3UAW9 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Brf2Q3UAW9 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.71□□□□□ -0.05
Brf2Q3UAW9 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.71□□□□□ -0.05
Brf2Q3UAW9 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.71□□□□□ -0.05
Brf2Q3UAW9 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Brf2Q3UAW9 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Brf2Q3UAW9 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Brf2Q3UAW9 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Brf2Q3UAW9 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Brf2Q3UAW9 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Brf2Q3UAW9 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Brf2Q3UAW9 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Brf2Q3UAW9 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Brf2Q3UAW9 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Brf2Q3UAW9 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.7□□□□□ -0.06
Brf2Q3UAW9 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Brf2Q3UAW9 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Brf2Q3UAW9 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.7□□□□□ -0.06
Brf2Q3UAW9 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.7□□□□□ -0.06
Brf2Q3UAW9 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Brf2Q3UAW9 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Brf2Q3UAW9 Gm27357-201ENSMUST00000183754 135 ntBASIC14.7□□□□□ -0.06
Brf2Q3UAW9 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.7□□□□□ -0.06
Brf2Q3UAW9 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.7□□□□□ -0.06
Brf2Q3UAW9 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.7□□□□□ -0.06
Brf2Q3UAW9 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Brf2Q3UAW9 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Brf2Q3UAW9 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Brf2Q3UAW9 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.7□□□□□ -0.06
Brf2Q3UAW9 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Brf2Q3UAW9 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Brf2Q3UAW9 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.7□□□□□ -0.06
Brf2Q3UAW9 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.7□□□□□ -0.06
Brf2Q3UAW9 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Brf2Q3UAW9 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Brf2Q3UAW9 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Brf2Q3UAW9 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Brf2Q3UAW9 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Brf2Q3UAW9 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Brf2Q3UAW9 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Brf2Q3UAW9 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.69□□□□□ -0.06
Brf2Q3UAW9 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brf2Q3UAW9 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brf2Q3UAW9 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brf2Q3UAW9 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brf2Q3UAW9 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brf2Q3UAW9 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brf2Q3UAW9 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brf2Q3UAW9 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brf2Q3UAW9 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.69□□□□□ -0.06
Brf2Q3UAW9 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.69□□□□□ -0.06
Brf2Q3UAW9 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.69□□□□□ -0.06
Brf2Q3UAW9 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brf2Q3UAW9 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brf2Q3UAW9 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brf2Q3UAW9 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brf2Q3UAW9 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brf2Q3UAW9 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brf2Q3UAW9 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.69□□□□□ -0.06
Brf2Q3UAW9 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.69□□□□□ -0.06
Brf2Q3UAW9 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brf2Q3UAW9 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brf2Q3UAW9 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brf2Q3UAW9 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brf2Q3UAW9 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Brf2Q3UAW9 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brf2Q3UAW9 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Brf2Q3UAW9 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brf2Q3UAW9 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Brf2Q3UAW9 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brf2Q3UAW9 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brf2Q3UAW9 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Brf2Q3UAW9 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.68□□□□□ -0.06
Brf2Q3UAW9 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Brf2Q3UAW9 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.68□□□□□ -0.06
Brf2Q3UAW9 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.68□□□□□ -0.06
Brf2Q3UAW9 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms