Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Khdc4Q3TCX3 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Khdc4Q3TCX3 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Khdc4Q3TCX3 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Khdc4Q3TCX3 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Khdc4Q3TCX3 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Khdc4Q3TCX3 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Khdc4Q3TCX3 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Khdc4Q3TCX3 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Khdc4Q3TCX3 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Khdc4Q3TCX3 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Khdc4Q3TCX3 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.84□□□□□ -0.03
Khdc4Q3TCX3 Gm4459-201ENSMUST00000118750 468 ntBASIC14.84□□□□□ -0.03
Khdc4Q3TCX3 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.84□□□□□ -0.03
Khdc4Q3TCX3 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
Khdc4Q3TCX3 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.84□□□□□ -0.03
Khdc4Q3TCX3 Gm2213-201ENSMUST00000197485 688 ntBASIC14.84□□□□□ -0.03
Khdc4Q3TCX3 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.84□□□□□ -0.03
Khdc4Q3TCX3 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Khdc4Q3TCX3 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Khdc4Q3TCX3 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Khdc4Q3TCX3 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Khdc4Q3TCX3 Gm15590-201ENSMUST00000078419 552 ntBASIC14.84□□□□□ -0.03
Khdc4Q3TCX3 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Khdc4Q3TCX3 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Khdc4Q3TCX3 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Khdc4Q3TCX3 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Khdc4Q3TCX3 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Khdc4Q3TCX3 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Khdc4Q3TCX3 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Khdc4Q3TCX3 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Khdc4Q3TCX3 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Khdc4Q3TCX3 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.83□□□□□ -0.03
Khdc4Q3TCX3 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Khdc4Q3TCX3 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Khdc4Q3TCX3 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Khdc4Q3TCX3 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Khdc4Q3TCX3 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Khdc4Q3TCX3 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Khdc4Q3TCX3 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Khdc4Q3TCX3 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Khdc4Q3TCX3 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Khdc4Q3TCX3 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.83□□□□□ -0.04
Khdc4Q3TCX3 Gm8097-201ENSMUST00000117903 829 ntBASIC14.83□□□□□ -0.04
Khdc4Q3TCX3 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.83□□□□□ -0.04
Khdc4Q3TCX3 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Khdc4Q3TCX3 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.83□□□□□ -0.04
Khdc4Q3TCX3 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Khdc4Q3TCX3 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Khdc4Q3TCX3 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Khdc4Q3TCX3 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Khdc4Q3TCX3 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Khdc4Q3TCX3 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Khdc4Q3TCX3 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Khdc4Q3TCX3 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Khdc4Q3TCX3 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Khdc4Q3TCX3 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Khdc4Q3TCX3 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Khdc4Q3TCX3 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Khdc4Q3TCX3 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Khdc4Q3TCX3 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Khdc4Q3TCX3 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Khdc4Q3TCX3 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Khdc4Q3TCX3 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Khdc4Q3TCX3 Gm12497-201ENSMUST00000138778 237 ntBASIC14.82□□□□□ -0.04
Khdc4Q3TCX3 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.82□□□□□ -0.04
Khdc4Q3TCX3 Gm5264-201ENSMUST00000190584 848 ntBASIC14.82□□□□□ -0.04
Khdc4Q3TCX3 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Khdc4Q3TCX3 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.82□□□□□ -0.04
Khdc4Q3TCX3 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Khdc4Q3TCX3 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Khdc4Q3TCX3 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Khdc4Q3TCX3 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Khdc4Q3TCX3 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Khdc4Q3TCX3 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.82□□□□□ -0.04
Khdc4Q3TCX3 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Khdc4Q3TCX3 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Khdc4Q3TCX3 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Khdc4Q3TCX3 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Khdc4Q3TCX3 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Khdc4Q3TCX3 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Khdc4Q3TCX3 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.82□□□□□ -0.04
Khdc4Q3TCX3 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.82□□□□□ -0.04
Khdc4Q3TCX3 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Khdc4Q3TCX3 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Khdc4Q3TCX3 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Khdc4Q3TCX3 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Khdc4Q3TCX3 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Khdc4Q3TCX3 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Khdc4Q3TCX3 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Khdc4Q3TCX3 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Khdc4Q3TCX3 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Khdc4Q3TCX3 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Khdc4Q3TCX3 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Khdc4Q3TCX3 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Khdc4Q3TCX3 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Khdc4Q3TCX3 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Khdc4Q3TCX3 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Khdc4Q3TCX3 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
Khdc4Q3TCX3 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms