Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Tff1Q08423 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Tff1Q08423 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tff1Q08423 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tff1Q08423 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Tff1Q08423 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.99□□□□□ -0.33
Tff1Q08423 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tff1Q08423 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.99□□□□□ -0.33
Tff1Q08423 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tff1Q08423 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Tff1Q08423 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tff1Q08423 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tff1Q08423 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tff1Q08423 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tff1Q08423 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Tff1Q08423 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tff1Q08423 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Tff1Q08423 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.99□□□□□ -0.33
Tff1Q08423 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tff1Q08423 Gm27357-201ENSMUST00000183754 135 ntBASIC12.99□□□□□ -0.33
Tff1Q08423 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC12.99□□□□□ -0.33
Tff1Q08423 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tff1Q08423 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tff1Q08423 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.99□□□□□ -0.33
Tff1Q08423 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tff1Q08423 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tff1Q08423 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tff1Q08423 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Tff1Q08423 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tff1Q08423 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.99□□□□□ -0.33
Tff1Q08423 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tff1Q08423 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tff1Q08423 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tff1Q08423 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tff1Q08423 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tff1Q08423 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tff1Q08423 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tff1Q08423 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Tff1Q08423 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tff1Q08423 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tff1Q08423 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.98□□□□□ -0.33
Tff1Q08423 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tff1Q08423 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tff1Q08423 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
Tff1Q08423 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tff1Q08423 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Tff1Q08423 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tff1Q08423 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tff1Q08423 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tff1Q08423 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tff1Q08423 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tff1Q08423 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tff1Q08423 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tff1Q08423 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tff1Q08423 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tff1Q08423 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tff1Q08423 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12.98□□□□□ -0.33
Tff1Q08423 Gm27742-201ENSMUST00000184667 60 ntBASIC12.98□□□□□ -0.33
Tff1Q08423 Gm37722-201ENSMUST00000193757 208 ntBASIC12.98□□□□□ -0.33
Tff1Q08423 Gm6443-201ENSMUST00000203599 874 ntBASIC12.98□□□□□ -0.33
Tff1Q08423 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tff1Q08423 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tff1Q08423 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tff1Q08423 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tff1Q08423 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tff1Q08423 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Tff1Q08423 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tff1Q08423 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tff1Q08423 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Tff1Q08423 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tff1Q08423 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tff1Q08423 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Tff1Q08423 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tff1Q08423 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tff1Q08423 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tff1Q08423 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tff1Q08423 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tff1Q08423 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.98□□□□□ -0.33
Tff1Q08423 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tff1Q08423 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tff1Q08423 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tff1Q08423 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tff1Q08423 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tff1Q08423 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tff1Q08423 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tff1Q08423 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tff1Q08423 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tff1Q08423 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tff1Q08423 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.97□□□□□ -0.33
Tff1Q08423 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tff1Q08423 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tff1Q08423 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tff1Q08423 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tff1Q08423 Gm25925-201ENSMUST00000158314 306 ntBASIC12.97□□□□□ -0.33
Tff1Q08423 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.97□□□□□ -0.33
Tff1Q08423 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Tff1Q08423 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Tff1Q08423 Gm28659-201ENSMUST00000188013 759 ntBASIC12.97□□□□□ -0.33
Tff1Q08423 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tff1Q08423 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms