Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcc1P97496 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcc1P97496 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcc1P97496 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcc1P97496 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcc1P97496 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcc1P97496 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Smarcc1P97496 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcc1P97496 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcc1P97496 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcc1P97496 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcc1P97496 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Smarcc1P97496 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Smarcc1P97496 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Smarcc1P97496 Gm12017-201ENSMUST00000122453 1003 ntBASIC19.46■□□□□ 0.71
Smarcc1P97496 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcc1P97496 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC19.46■□□□□ 0.71
Smarcc1P97496 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC19.46■□□□□ 0.71
Smarcc1P97496 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC19.46■□□□□ 0.71
Smarcc1P97496 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC19.46■□□□□ 0.71
Smarcc1P97496 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcc1P97496 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcc1P97496 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcc1P97496 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Smarcc1P97496 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcc1P97496 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcc1P97496 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcc1P97496 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC19.46■□□□□ 0.71
Smarcc1P97496 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcc1P97496 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcc1P97496 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcc1P97496 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcc1P97496 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Smarcc1P97496 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Smarcc1P97496 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.7
Smarcc1P97496 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcc1P97496 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcc1P97496 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcc1P97496 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcc1P97496 Gm7336-201ENSMUST00000107041 1232 ntBASIC19.45■□□□□ 0.7
Smarcc1P97496 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Smarcc1P97496 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcc1P97496 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcc1P97496 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Smarcc1P97496 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC19.45■□□□□ 0.7
Smarcc1P97496 AC159621.2-201ENSMUST00000223519 1326 ntBASIC19.45■□□□□ 0.7
Smarcc1P97496 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Smarcc1P97496 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcc1P97496 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcc1P97496 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcc1P97496 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Smarcc1P97496 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcc1P97496 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Smarcc1P97496 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Smarcc1P97496 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcc1P97496 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcc1P97496 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcc1P97496 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcc1P97496 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcc1P97496 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcc1P97496 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Smarcc1P97496 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC19.44■□□□□ 0.7
Smarcc1P97496 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC19.44■□□□□ 0.7
Smarcc1P97496 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC19.44■□□□□ 0.7
Smarcc1P97496 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcc1P97496 Gm5779-201ENSMUST00000218467 910 ntBASIC19.44■□□□□ 0.7
Smarcc1P97496 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcc1P97496 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Smarcc1P97496 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Smarcc1P97496 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcc1P97496 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcc1P97496 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcc1P97496 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcc1P97496 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcc1P97496 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcc1P97496 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcc1P97496 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcc1P97496 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC19.43■□□□□ 0.7
Smarcc1P97496 Gm23547-201ENSMUST00000158210 271 ntBASIC19.43■□□□□ 0.7
Smarcc1P97496 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC19.43■□□□□ 0.7
Smarcc1P97496 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Smarcc1P97496 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC19.43■□□□□ 0.7
Smarcc1P97496 AC131710.1-201ENSMUST00000228336 990 ntBASIC19.43■□□□□ 0.7
Smarcc1P97496 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcc1P97496 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC19.43■□□□□ 0.7
Smarcc1P97496 Gm10154-201ENSMUST00000084445 354 ntBASIC19.43■□□□□ 0.7
Smarcc1P97496 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcc1P97496 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcc1P97496 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcc1P97496 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcc1P97496 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcc1P97496 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcc1P97496 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcc1P97496 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcc1P97496 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcc1P97496 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Smarcc1P97496 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcc1P97496 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Smarcc1P97496 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcc1P97496 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms