Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SgcbP82349 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.9□□□□□ -0.18
SgcbP82349 Gm19164-201ENSMUST00000210667 640 ntBASIC13.9□□□□□ -0.18
SgcbP82349 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SgcbP82349 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SgcbP82349 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SgcbP82349 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SgcbP82349 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SgcbP82349 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SgcbP82349 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SgcbP82349 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SgcbP82349 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SgcbP82349 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
SgcbP82349 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SgcbP82349 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SgcbP82349 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SgcbP82349 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
SgcbP82349 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
SgcbP82349 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
SgcbP82349 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SgcbP82349 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SgcbP82349 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SgcbP82349 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SgcbP82349 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SgcbP82349 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SgcbP82349 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SgcbP82349 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SgcbP82349 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SgcbP82349 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SgcbP82349 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
SgcbP82349 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SgcbP82349 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SgcbP82349 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.89□□□□□ -0.19
SgcbP82349 Gm18733-201ENSMUST00000173950 856 ntBASIC13.89□□□□□ -0.19
SgcbP82349 Gm10060-201ENSMUST00000212002 111 ntBASIC13.89□□□□□ -0.19
SgcbP82349 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SgcbP82349 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.89□□□□□ -0.19
SgcbP82349 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SgcbP82349 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SgcbP82349 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SgcbP82349 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SgcbP82349 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SgcbP82349 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SgcbP82349 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SgcbP82349 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SgcbP82349 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SgcbP82349 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SgcbP82349 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SgcbP82349 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SgcbP82349 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SgcbP82349 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.89□□□□□ -0.19
SgcbP82349 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.89□□□□□ -0.19
SgcbP82349 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SgcbP82349 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SgcbP82349 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SgcbP82349 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SgcbP82349 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SgcbP82349 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SgcbP82349 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SgcbP82349 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SgcbP82349 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.88□□□□□ -0.19
SgcbP82349 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SgcbP82349 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SgcbP82349 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SgcbP82349 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SgcbP82349 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.88□□□□□ -0.19
SgcbP82349 Gm11780-201ENSMUST00000136880 516 ntBASIC13.88□□□□□ -0.19
SgcbP82349 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SgcbP82349 Gm6089-201ENSMUST00000197666 938 ntBASIC13.88□□□□□ -0.19
SgcbP82349 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SgcbP82349 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SgcbP82349 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SgcbP82349 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SgcbP82349 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SgcbP82349 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SgcbP82349 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SgcbP82349 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SgcbP82349 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SgcbP82349 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SgcbP82349 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SgcbP82349 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SgcbP82349 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SgcbP82349 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SgcbP82349 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SgcbP82349 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SgcbP82349 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SgcbP82349 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SgcbP82349 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SgcbP82349 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SgcbP82349 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SgcbP82349 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.87□□□□□ -0.19
SgcbP82349 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SgcbP82349 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SgcbP82349 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SgcbP82349 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.87□□□□□ -0.19
SgcbP82349 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SgcbP82349 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.87□□□□□ -0.19
SgcbP82349 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SgcbP82349 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SgcbP82349 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms