Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.88■□□□□ 0.29
CiitaP79621 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CiitaP79621 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CiitaP79621 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CiitaP79621 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CiitaP79621 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.88■□□□□ 0.29
CiitaP79621 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.88■□□□□ 0.29
CiitaP79621 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.88■□□□□ 0.29
CiitaP79621 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CiitaP79621 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.88■□□□□ 0.29
CiitaP79621 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.88■□□□□ 0.29
CiitaP79621 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CiitaP79621 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CiitaP79621 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CiitaP79621 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CiitaP79621 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CiitaP79621 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CiitaP79621 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CiitaP79621 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CiitaP79621 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CiitaP79621 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CiitaP79621 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CiitaP79621 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CiitaP79621 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CiitaP79621 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CiitaP79621 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CiitaP79621 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CiitaP79621 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CiitaP79621 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CiitaP79621 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CiitaP79621 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CiitaP79621 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CiitaP79621 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CiitaP79621 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.87■□□□□ 0.29
CiitaP79621 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CiitaP79621 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CiitaP79621 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CiitaP79621 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CiitaP79621 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.87■□□□□ 0.29
CiitaP79621 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CiitaP79621 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.87■□□□□ 0.29
CiitaP79621 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CiitaP79621 Gm7787-201ENSMUST00000216858 688 ntBASIC16.87■□□□□ 0.29
CiitaP79621 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CiitaP79621 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CiitaP79621 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CiitaP79621 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CiitaP79621 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.87■□□□□ 0.29
CiitaP79621 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CiitaP79621 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CiitaP79621 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.87■□□□□ 0.29
CiitaP79621 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CiitaP79621 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CiitaP79621 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CiitaP79621 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CiitaP79621 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CiitaP79621 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CiitaP79621 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CiitaP79621 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CiitaP79621 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CiitaP79621 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CiitaP79621 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CiitaP79621 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CiitaP79621 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.86■□□□□ 0.29
CiitaP79621 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.86■□□□□ 0.29
CiitaP79621 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.86■□□□□ 0.29
CiitaP79621 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CiitaP79621 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CiitaP79621 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CiitaP79621 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CiitaP79621 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CiitaP79621 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CiitaP79621 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CiitaP79621 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CiitaP79621 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CiitaP79621 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CiitaP79621 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CiitaP79621 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CiitaP79621 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CiitaP79621 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
CiitaP79621 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
CiitaP79621 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CiitaP79621 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.85■□□□□ 0.29
CiitaP79621 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.85■□□□□ 0.29
CiitaP79621 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.85■□□□□ 0.29
CiitaP79621 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CiitaP79621 Gm10175-201ENSMUST00000086013 645 ntBASIC16.85■□□□□ 0.29
CiitaP79621 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.85■□□□□ 0.29
CiitaP79621 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CiitaP79621 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CiitaP79621 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CiitaP79621 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CiitaP79621 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CiitaP79621 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CiitaP79621 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CiitaP79621 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CiitaP79621 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CiitaP79621 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CiitaP79621 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CiitaP79621 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms