Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Six5P70178 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.61□□□□□ -0.07
Six5P70178 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Six5P70178 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Six5P70178 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Six5P70178 Gm10819-201ENSMUST00000099988 561 ntBASIC14.61□□□□□ -0.07
Six5P70178 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Six5P70178 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.61□□□□□ -0.07
Six5P70178 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Six5P70178 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Six5P70178 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Six5P70178 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Six5P70178 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Six5P70178 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.61□□□□□ -0.07
Six5P70178 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Six5P70178 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Six5P70178 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Six5P70178 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Six5P70178 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Six5P70178 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Six5P70178 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Six5P70178 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Six5P70178 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Six5P70178 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Six5P70178 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Six5P70178 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Six5P70178 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Six5P70178 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Six5P70178 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Six5P70178 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Six5P70178 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.6□□□□□ -0.07
Six5P70178 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Six5P70178 Gm8097-201ENSMUST00000117903 829 ntBASIC14.6□□□□□ -0.07
Six5P70178 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Six5P70178 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Six5P70178 Gm27459-201ENSMUST00000184860 107 ntBASIC14.6□□□□□ -0.07
Six5P70178 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.6□□□□□ -0.07
Six5P70178 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Six5P70178 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Six5P70178 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Six5P70178 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Six5P70178 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Six5P70178 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Six5P70178 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Six5P70178 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Six5P70178 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.6□□□□□ -0.07
Six5P70178 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Six5P70178 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Six5P70178 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Six5P70178 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Six5P70178 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Six5P70178 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Six5P70178 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Six5P70178 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.6□□□□□ -0.07
Six5P70178 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Six5P70178 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Six5P70178 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.59□□□□□ -0.07
Six5P70178 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.59□□□□□ -0.07
Six5P70178 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Six5P70178 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Six5P70178 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Six5P70178 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Six5P70178 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Six5P70178 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Six5P70178 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Six5P70178 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.59□□□□□ -0.07
Six5P70178 Gm17971-201ENSMUST00000190239 806 ntBASIC14.59□□□□□ -0.07
Six5P70178 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.59□□□□□ -0.07
Six5P70178 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.59□□□□□ -0.07
Six5P70178 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.59□□□□□ -0.07
Six5P70178 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Six5P70178 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Six5P70178 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Six5P70178 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Six5P70178 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Six5P70178 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Six5P70178 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Six5P70178 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Six5P70178 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Six5P70178 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Six5P70178 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Six5P70178 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Six5P70178 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Six5P70178 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Six5P70178 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Six5P70178 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Six5P70178 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Six5P70178 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Six5P70178 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Six5P70178 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
Six5P70178 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Six5P70178 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.58□□□□□ -0.07
Six5P70178 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Six5P70178 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Six5P70178 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Six5P70178 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Six5P70178 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Six5P70178 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Six5P70178 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Six5P70178 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms