Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Rpl39P62892 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpl39P62892 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC11.15□□□□□ -0.62
Rpl39P62892 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rpl39P62892 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rpl39P62892 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Rpl39P62892 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rpl39P62892 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rpl39P62892 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rpl39P62892 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rpl39P62892 Gm11336-201ENSMUST00000118168 334 ntBASIC11.15□□□□□ -0.62
Rpl39P62892 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rpl39P62892 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Rpl39P62892 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC11.15□□□□□ -0.62
Rpl39P62892 Gm29707-201ENSMUST00000196325 491 ntBASIC11.15□□□□□ -0.62
Rpl39P62892 Gm43353-201ENSMUST00000199224 1295 ntBASIC11.15□□□□□ -0.62
Rpl39P62892 Gm3375-201ENSMUST00000203929 796 ntBASIC11.15□□□□□ -0.62
Rpl39P62892 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rpl39P62892 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Rpl39P62892 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rpl39P62892 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rpl39P62892 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rpl39P62892 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rpl39P62892 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC11.15□□□□□ -0.62
Rpl39P62892 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rpl39P62892 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC11.15□□□□□ -0.62
Rpl39P62892 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rpl39P62892 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC11.15□□□□□ -0.62
Rpl39P62892 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rpl39P62892 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC11.15□□□□□ -0.63
Rpl39P62892 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rpl39P62892 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rpl39P62892 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Rpl39P62892 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rpl39P62892 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rpl39P62892 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rpl39P62892 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rpl39P62892 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rpl39P62892 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC11.14□□□□□ -0.63
Rpl39P62892 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rpl39P62892 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Rpl39P62892 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rpl39P62892 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Rpl39P62892 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rpl39P62892 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rpl39P62892 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rpl39P62892 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rpl39P62892 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rpl39P62892 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Rpl39P62892 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rpl39P62892 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rpl39P62892 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Rpl39P62892 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rpl39P62892 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Rpl39P62892 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rpl39P62892 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rpl39P62892 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC11.14□□□□□ -0.63
Rpl39P62892 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC11.14□□□□□ -0.63
Rpl39P62892 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC11.14□□□□□ -0.63
Rpl39P62892 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC11.14□□□□□ -0.63
Rpl39P62892 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC11.14□□□□□ -0.63
Rpl39P62892 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rpl39P62892 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rpl39P62892 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Rpl39P62892 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Rpl39P62892 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rpl39P62892 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rpl39P62892 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rpl39P62892 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rpl39P62892 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rpl39P62892 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rpl39P62892 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rpl39P62892 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rpl39P62892 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rpl39P62892 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rpl39P62892 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rpl39P62892 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rpl39P62892 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rpl39P62892 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rpl39P62892 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rpl39P62892 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rpl39P62892 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Rpl39P62892 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rpl39P62892 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rpl39P62892 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rpl39P62892 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rpl39P62892 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Rpl39P62892 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rpl39P62892 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC11.13□□□□□ -0.63
Rpl39P62892 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC11.13□□□□□ -0.63
Rpl39P62892 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Rpl39P62892 Gm27463-201ENSMUST00000183569 57 ntBASIC11.13□□□□□ -0.63
Rpl39P62892 Odf3b-204ENSMUST00000227834 930 ntBASIC11.13□□□□□ -0.63
Rpl39P62892 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rpl39P62892 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Rpl39P62892 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rpl39P62892 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rpl39P62892 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rpl39P62892 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rpl39P62892 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms