Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm5P62322 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm5P62322 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm5P62322 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Lsm5P62322 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm5P62322 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm5P62322 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Lsm5P62322 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Lsm5P62322 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm5P62322 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm5P62322 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm5P62322 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm5P62322 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm5P62322 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm5P62322 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm5P62322 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm5P62322 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm5P62322 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm5P62322 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.04□□□□□ -0.32
Lsm5P62322 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Lsm5P62322 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.04□□□□□ -0.32
Lsm5P62322 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm5P62322 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm5P62322 Gm12933-201ENSMUST00000120203 872 ntBASIC13.04□□□□□ -0.32
Lsm5P62322 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm5P62322 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC13.04□□□□□ -0.32
Lsm5P62322 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm5P62322 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC13.04□□□□□ -0.32
Lsm5P62322 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Lsm5P62322 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Lsm5P62322 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm5P62322 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm5P62322 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm5P62322 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm5P62322 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm5P62322 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm5P62322 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm5P62322 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm5P62322 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm5P62322 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Lsm5P62322 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm5P62322 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Lsm5P62322 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm5P62322 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm5P62322 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm5P62322 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.03□□□□□ -0.32
Lsm5P62322 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Lsm5P62322 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Lsm5P62322 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm5P62322 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm5P62322 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm5P62322 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm5P62322 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Lsm5P62322 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm5P62322 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Lsm5P62322 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm5P62322 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm5P62322 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Lsm5P62322 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm5P62322 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm5P62322 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm5P62322 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Lsm5P62322 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm5P62322 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm5P62322 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm5P62322 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm5P62322 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.02□□□□□ -0.32
Lsm5P62322 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Lsm5P62322 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm5P62322 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.02□□□□□ -0.32
Lsm5P62322 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm5P62322 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm5P62322 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm5P62322 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm5P62322 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Lsm5P62322 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Lsm5P62322 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Lsm5P62322 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Lsm5P62322 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.02□□□□□ -0.33
Lsm5P62322 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Lsm5P62322 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC13.02□□□□□ -0.33
Lsm5P62322 Gm18115-201ENSMUST00000221209 621 ntBASIC13.02□□□□□ -0.33
Lsm5P62322 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Lsm5P62322 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm5P62322 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm5P62322 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Lsm5P62322 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm5P62322 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.02□□□□□ -0.33
Lsm5P62322 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm5P62322 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm5P62322 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm5P62322 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm5P62322 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm5P62322 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Lsm5P62322 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Lsm5P62322 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm5P62322 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Lsm5P62322 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm5P62322 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm5P62322 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms