Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lmo4P61969 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lmo4P61969 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lmo4P61969 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Lmo4P61969 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lmo4P61969 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lmo4P61969 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lmo4P61969 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lmo4P61969 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lmo4P61969 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Lmo4P61969 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lmo4P61969 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lmo4P61969 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lmo4P61969 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lmo4P61969 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lmo4P61969 Mir1895-201ENSMUST00000122615 79 ntBASIC12.57□□□□□ -0.4
Lmo4P61969 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.57□□□□□ -0.4
Lmo4P61969 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.57□□□□□ -0.4
Lmo4P61969 Gm11025-201ENSMUST00000140773 466 ntBASIC12.57□□□□□ -0.4
Lmo4P61969 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lmo4P61969 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Lmo4P61969 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lmo4P61969 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.57□□□□□ -0.4
Lmo4P61969 Thap2-203ENSMUST00000218989 527 ntBASIC12.57□□□□□ -0.4
Lmo4P61969 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lmo4P61969 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lmo4P61969 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lmo4P61969 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Lmo4P61969 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lmo4P61969 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lmo4P61969 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lmo4P61969 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lmo4P61969 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lmo4P61969 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Lmo4P61969 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lmo4P61969 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Lmo4P61969 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lmo4P61969 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lmo4P61969 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Lmo4P61969 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Lmo4P61969 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lmo4P61969 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lmo4P61969 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lmo4P61969 Gm12008-201ENSMUST00000117791 755 ntBASIC12.56□□□□□ -0.4
Lmo4P61969 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lmo4P61969 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.56□□□□□ -0.4
Lmo4P61969 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.56□□□□□ -0.4
Lmo4P61969 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.56□□□□□ -0.4
Lmo4P61969 Gm45612-201ENSMUST00000211320 160 ntBASIC12.56□□□□□ -0.4
Lmo4P61969 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Lmo4P61969 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lmo4P61969 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Lmo4P61969 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lmo4P61969 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lmo4P61969 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.56□□□□□ -0.4
Lmo4P61969 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lmo4P61969 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lmo4P61969 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lmo4P61969 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.56□□□□□ -0.4
Lmo4P61969 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lmo4P61969 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Lmo4P61969 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lmo4P61969 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lmo4P61969 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.56□□□□□ -0.4
Lmo4P61969 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Lmo4P61969 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lmo4P61969 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lmo4P61969 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lmo4P61969 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Lmo4P61969 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lmo4P61969 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lmo4P61969 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.55□□□□□ -0.4
Lmo4P61969 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Lmo4P61969 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lmo4P61969 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lmo4P61969 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC12.55□□□□□ -0.4
Lmo4P61969 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lmo4P61969 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lmo4P61969 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lmo4P61969 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lmo4P61969 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Lmo4P61969 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Lmo4P61969 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.55□□□□□ -0.4
Lmo4P61969 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.55□□□□□ -0.4
Lmo4P61969 Gm10499-201ENSMUST00000174094 934 ntBASIC12.55□□□□□ -0.4
Lmo4P61969 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.55□□□□□ -0.4
Lmo4P61969 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.55□□□□□ -0.4
Lmo4P61969 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.55□□□□□ -0.4
Lmo4P61969 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.55□□□□□ -0.4
Lmo4P61969 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.55□□□□□ -0.4
Lmo4P61969 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lmo4P61969 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.55□□□□□ -0.4
Lmo4P61969 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Lmo4P61969 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lmo4P61969 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lmo4P61969 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lmo4P61969 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lmo4P61969 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.55□□□□□ -0.4
Lmo4P61969 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lmo4P61969 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms