Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61a1P61620 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61a1P61620 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Sec61a1P61620 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61a1P61620 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61a1P61620 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61a1P61620 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61a1P61620 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61a1P61620 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sec61a1P61620 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sec61a1P61620 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Sec61a1P61620 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Sec61a1P61620 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sec61a1P61620 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.77□□□□□ -0.21
Sec61a1P61620 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sec61a1P61620 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sec61a1P61620 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sec61a1P61620 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sec61a1P61620 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.77□□□□□ -0.21
Sec61a1P61620 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sec61a1P61620 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC13.77□□□□□ -0.21
Sec61a1P61620 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sec61a1P61620 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sec61a1P61620 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.77□□□□□ -0.21
Sec61a1P61620 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sec61a1P61620 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Sec61a1P61620 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sec61a1P61620 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sec61a1P61620 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.77□□□□□ -0.21
Sec61a1P61620 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Sec61a1P61620 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sec61a1P61620 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sec61a1P61620 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sec61a1P61620 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sec61a1P61620 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Sec61a1P61620 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sec61a1P61620 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.76□□□□□ -0.21
Sec61a1P61620 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sec61a1P61620 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sec61a1P61620 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sec61a1P61620 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sec61a1P61620 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sec61a1P61620 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sec61a1P61620 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Sec61a1P61620 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sec61a1P61620 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sec61a1P61620 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sec61a1P61620 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sec61a1P61620 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sec61a1P61620 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.76□□□□□ -0.21
Sec61a1P61620 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sec61a1P61620 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sec61a1P61620 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sec61a1P61620 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sec61a1P61620 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sec61a1P61620 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sec61a1P61620 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sec61a1P61620 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sec61a1P61620 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sec61a1P61620 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sec61a1P61620 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sec61a1P61620 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sec61a1P61620 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Sec61a1P61620 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Sec61a1P61620 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Sec61a1P61620 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.75□□□□□ -0.21
Sec61a1P61620 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sec61a1P61620 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sec61a1P61620 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.75□□□□□ -0.21
Sec61a1P61620 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Sec61a1P61620 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sec61a1P61620 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sec61a1P61620 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sec61a1P61620 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sec61a1P61620 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sec61a1P61620 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sec61a1P61620 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.75□□□□□ -0.21
Sec61a1P61620 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sec61a1P61620 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sec61a1P61620 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sec61a1P61620 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Sec61a1P61620 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.75□□□□□ -0.21
Sec61a1P61620 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sec61a1P61620 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sec61a1P61620 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.75□□□□□ -0.21
Sec61a1P61620 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sec61a1P61620 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Sec61a1P61620 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sec61a1P61620 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sec61a1P61620 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sec61a1P61620 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sec61a1P61620 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Sec61a1P61620 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sec61a1P61620 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Sec61a1P61620 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.74□□□□□ -0.21
Sec61a1P61620 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sec61a1P61620 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.74□□□□□ -0.21
Sec61a1P61620 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sec61a1P61620 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Sec61a1P61620 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms