Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.66■□□□□ 0.1
SmoP56726 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SmoP56726 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SmoP56726 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SmoP56726 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SmoP56726 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SmoP56726 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SmoP56726 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SmoP56726 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SmoP56726 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.65■□□□□ 0.1
SmoP56726 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SmoP56726 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SmoP56726 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SmoP56726 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SmoP56726 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SmoP56726 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SmoP56726 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SmoP56726 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SmoP56726 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SmoP56726 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SmoP56726 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.65■□□□□ 0.1
SmoP56726 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.65■□□□□ 0.1
SmoP56726 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.65■□□□□ 0.1
SmoP56726 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.65■□□□□ 0.1
SmoP56726 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.65■□□□□ 0.1
SmoP56726 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.65■□□□□ 0.1
SmoP56726 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.65■□□□□ 0.1
SmoP56726 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SmoP56726 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SmoP56726 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SmoP56726 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SmoP56726 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SmoP56726 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SmoP56726 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SmoP56726 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.1
SmoP56726 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SmoP56726 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SmoP56726 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SmoP56726 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SmoP56726 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SmoP56726 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SmoP56726 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SmoP56726 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.64■□□□□ 0.09
SmoP56726 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
SmoP56726 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.64■□□□□ 0.09
SmoP56726 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SmoP56726 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SmoP56726 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SmoP56726 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SmoP56726 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SmoP56726 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SmoP56726 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SmoP56726 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SmoP56726 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SmoP56726 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SmoP56726 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SmoP56726 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SmoP56726 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SmoP56726 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SmoP56726 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SmoP56726 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.63■□□□□ 0.09
SmoP56726 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SmoP56726 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
SmoP56726 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SmoP56726 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SmoP56726 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SmoP56726 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SmoP56726 Gm11779-201ENSMUST00000118541 368 ntBASIC15.63■□□□□ 0.09
SmoP56726 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.63■□□□□ 0.09
SmoP56726 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
SmoP56726 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.63■□□□□ 0.09
SmoP56726 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.63■□□□□ 0.09
SmoP56726 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
SmoP56726 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SmoP56726 Gm7787-201ENSMUST00000216858 688 ntBASIC15.63■□□□□ 0.09
SmoP56726 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.63■□□□□ 0.09
SmoP56726 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SmoP56726 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SmoP56726 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SmoP56726 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SmoP56726 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SmoP56726 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SmoP56726 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SmoP56726 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SmoP56726 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.63■□□□□ 0.09
SmoP56726 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SmoP56726 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SmoP56726 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SmoP56726 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.63■□□□□ 0.09
SmoP56726 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SmoP56726 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SmoP56726 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SmoP56726 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SmoP56726 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SmoP56726 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SmoP56726 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
SmoP56726 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.62■□□□□ 0.09
SmoP56726 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SmoP56726 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SmoP56726 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms