Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cks2P56390 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.05□□□□□ -0.32
Cks2P56390 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cks2P56390 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Cks2P56390 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cks2P56390 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.05□□□□□ -0.32
Cks2P56390 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cks2P56390 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cks2P56390 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.05□□□□□ -0.32
Cks2P56390 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC13.05□□□□□ -0.32
Cks2P56390 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cks2P56390 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cks2P56390 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Cks2P56390 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cks2P56390 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cks2P56390 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cks2P56390 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cks2P56390 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cks2P56390 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cks2P56390 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.04□□□□□ -0.32
Cks2P56390 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cks2P56390 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cks2P56390 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cks2P56390 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cks2P56390 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cks2P56390 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cks2P56390 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cks2P56390 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cks2P56390 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cks2P56390 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Cks2P56390 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cks2P56390 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.04□□□□□ -0.32
Cks2P56390 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.04□□□□□ -0.32
Cks2P56390 Mir6404-201ENSMUST00000183699 94 ntBASIC13.04□□□□□ -0.32
Cks2P56390 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC13.04□□□□□ -0.32
Cks2P56390 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cks2P56390 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.04□□□□□ -0.32
Cks2P56390 AC134329.2-201ENSMUST00000217897 428 ntBASIC13.04□□□□□ -0.32
Cks2P56390 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.04□□□□□ -0.32
Cks2P56390 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.04□□□□□ -0.32
Cks2P56390 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cks2P56390 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cks2P56390 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cks2P56390 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cks2P56390 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Cks2P56390 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cks2P56390 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Cks2P56390 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.04□□□□□ -0.32
Cks2P56390 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cks2P56390 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cks2P56390 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cks2P56390 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Cks2P56390 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cks2P56390 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cks2P56390 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cks2P56390 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cks2P56390 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cks2P56390 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cks2P56390 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cks2P56390 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cks2P56390 BC037039-201ENSMUST00000192003 2205 ntBASIC13.03□□□□□ -0.32
Cks2P56390 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cks2P56390 Gm11355-201ENSMUST00000121120 306 ntBASIC13.03□□□□□ -0.32
Cks2P56390 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cks2P56390 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC13.03□□□□□ -0.32
Cks2P56390 Gm7889-201ENSMUST00000185591 958 ntBASIC13.03□□□□□ -0.32
Cks2P56390 AL672049.1-201ENSMUST00000197943 91 ntBASIC13.03□□□□□ -0.32
Cks2P56390 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.03□□□□□ -0.32
Cks2P56390 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cks2P56390 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cks2P56390 Gm21559-201ENSMUST00000220638 855 ntBASIC13.03□□□□□ -0.32
Cks2P56390 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
Cks2P56390 Gm8587-201ENSMUST00000076538 843 ntBASIC13.03□□□□□ -0.32
Cks2P56390 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.03□□□□□ -0.32
Cks2P56390 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cks2P56390 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cks2P56390 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.03□□□□□ -0.32
Cks2P56390 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cks2P56390 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.03□□□□□ -0.32
Cks2P56390 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cks2P56390 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cks2P56390 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cks2P56390 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cks2P56390 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cks2P56390 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
Cks2P56390 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cks2P56390 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cks2P56390 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cks2P56390 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Cks2P56390 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cks2P56390 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cks2P56390 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cks2P56390 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cks2P56390 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.02□□□□□ -0.32
Cks2P56390 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cks2P56390 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cks2P56390 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC13.02□□□□□ -0.33
Cks2P56390 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cks2P56390 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.02□□□□□ -0.33
Cks2P56390 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms