Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Pdx1P52946 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pdx1P52946 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pdx1P52946 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pdx1P52946 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pdx1P52946 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pdx1P52946 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pdx1P52946 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pdx1P52946 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pdx1P52946 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pdx1P52946 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.42■□□□□ 0.06
Pdx1P52946 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.42■□□□□ 0.06
Pdx1P52946 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.42■□□□□ 0.06
Pdx1P52946 Gm5864-201ENSMUST00000202263 970 ntBASIC15.42■□□□□ 0.06
Pdx1P52946 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pdx1P52946 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pdx1P52946 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pdx1P52946 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pdx1P52946 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.42■□□□□ 0.06
Pdx1P52946 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pdx1P52946 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pdx1P52946 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdx1P52946 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdx1P52946 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdx1P52946 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdx1P52946 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdx1P52946 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdx1P52946 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Pdx1P52946 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pdx1P52946 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdx1P52946 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdx1P52946 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdx1P52946 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pdx1P52946 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
Pdx1P52946 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdx1P52946 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pdx1P52946 Gm8344-201ENSMUST00000119813 856 ntBASIC15.41■□□□□ 0.06
Pdx1P52946 Gm27646-201ENSMUST00000183989 110 ntBASIC15.41■□□□□ 0.06
Pdx1P52946 Gm6376-201ENSMUST00000209407 580 ntBASIC15.41■□□□□ 0.06
Pdx1P52946 Gm19164-201ENSMUST00000210667 640 ntBASIC15.41■□□□□ 0.06
Pdx1P52946 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Pdx1P52946 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.41■□□□□ 0.06
Pdx1P52946 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Pdx1P52946 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdx1P52946 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdx1P52946 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Pdx1P52946 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdx1P52946 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdx1P52946 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pdx1P52946 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdx1P52946 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdx1P52946 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.4■□□□□ 0.06
Pdx1P52946 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdx1P52946 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdx1P52946 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pdx1P52946 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdx1P52946 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdx1P52946 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdx1P52946 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdx1P52946 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdx1P52946 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdx1P52946 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdx1P52946 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdx1P52946 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdx1P52946 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pdx1P52946 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.4■□□□□ 0.06
Pdx1P52946 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdx1P52946 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pdx1P52946 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pdx1P52946 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Pdx1P52946 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Pdx1P52946 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.4■□□□□ 0.06
Pdx1P52946 Rps4l-201ENSMUST00000071745 943 ntBASIC15.4■□□□□ 0.06
Pdx1P52946 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdx1P52946 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdx1P52946 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdx1P52946 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Pdx1P52946 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdx1P52946 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pdx1P52946 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdx1P52946 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdx1P52946 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdx1P52946 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdx1P52946 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.4■□□□□ 0.06
Pdx1P52946 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Pdx1P52946 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.4■□□□□ 0.06
Pdx1P52946 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdx1P52946 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Pdx1P52946 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pdx1P52946 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pdx1P52946 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.39■□□□□ 0.05
Pdx1P52946 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pdx1P52946 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pdx1P52946 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.39■□□□□ 0.05
Pdx1P52946 Gm13884-201ENSMUST00000118103 829 ntBASIC15.39■□□□□ 0.05
Pdx1P52946 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.39■□□□□ 0.05
Pdx1P52946 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pdx1P52946 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.39■□□□□ 0.05
Pdx1P52946 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.39■□□□□ 0.05
Pdx1P52946 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms