Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga2P52927 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga2P52927 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga2P52927 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga2P52927 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga2P52927 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga2P52927 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC13.29□□□□□ -0.28
Hmga2P52927 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga2P52927 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC13.29□□□□□ -0.28
Hmga2P52927 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga2P52927 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.29□□□□□ -0.28
Hmga2P52927 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC13.29□□□□□ -0.28
Hmga2P52927 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga2P52927 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga2P52927 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga2P52927 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga2P52927 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga2P52927 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga2P52927 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga2P52927 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Hmga2P52927 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Hmga2P52927 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Hmga2P52927 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Hmga2P52927 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga2P52927 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga2P52927 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga2P52927 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Hmga2P52927 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga2P52927 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga2P52927 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga2P52927 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.28□□□□□ -0.28
Hmga2P52927 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga2P52927 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga2P52927 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga2P52927 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.28□□□□□ -0.28
Hmga2P52927 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga2P52927 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga2P52927 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga2P52927 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC13.28□□□□□ -0.28
Hmga2P52927 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Hmga2P52927 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC13.28□□□□□ -0.28
Hmga2P52927 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga2P52927 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga2P52927 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga2P52927 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga2P52927 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga2P52927 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga2P52927 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga2P52927 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga2P52927 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga2P52927 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga2P52927 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga2P52927 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga2P52927 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga2P52927 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Hmga2P52927 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Hmga2P52927 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga2P52927 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga2P52927 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.27□□□□□ -0.28
Hmga2P52927 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hmga2P52927 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hmga2P52927 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Hmga2P52927 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hmga2P52927 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Hmga2P52927 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.27□□□□□ -0.29
Hmga2P52927 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmga2P52927 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Hmga2P52927 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.27□□□□□ -0.29
Hmga2P52927 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC13.27□□□□□ -0.29
Hmga2P52927 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.27□□□□□ -0.29
Hmga2P52927 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmga2P52927 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hmga2P52927 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmga2P52927 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmga2P52927 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC13.27□□□□□ -0.29
Hmga2P52927 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Hmga2P52927 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmga2P52927 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmga2P52927 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Hmga2P52927 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Hmga2P52927 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.27□□□□□ -0.29
Hmga2P52927 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Hmga2P52927 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Hmga2P52927 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmga2P52927 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmga2P52927 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmga2P52927 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmga2P52927 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmga2P52927 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmga2P52927 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmga2P52927 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hmga2P52927 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hmga2P52927 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hmga2P52927 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmga2P52927 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmga2P52927 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hmga2P52927 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Hmga2P52927 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Hmga2P52927 Gm12134-201ENSMUST00000122109 520 ntBASIC13.26□□□□□ -0.29
Hmga2P52927 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms