Protein–RNA interactions for Protein: P49962

Srp9, Signal recognition particle 9 kDa protein, mousemouse

Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp9P49962 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Srp9P49962 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Srp9P49962 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC13.31□□□□□ -0.28
Srp9P49962 Gm18032-201ENSMUST00000222541 538 ntBASIC13.31□□□□□ -0.28
Srp9P49962 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Srp9P49962 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Srp9P49962 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Srp9P49962 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Srp9P49962 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC13.31□□□□□ -0.28
Srp9P49962 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Srp9P49962 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Srp9P49962 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Srp9P49962 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.31□□□□□ -0.28
Srp9P49962 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Srp9P49962 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Srp9P49962 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Srp9P49962 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Srp9P49962 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.3□□□□□ -0.28
Srp9P49962 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Srp9P49962 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.3□□□□□ -0.28
Srp9P49962 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Srp9P49962 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Srp9P49962 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Srp9P49962 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Srp9P49962 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Srp9P49962 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Srp9P49962 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Srp9P49962 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Srp9P49962 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Srp9P49962 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Srp9P49962 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Srp9P49962 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Srp9P49962 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.3□□□□□ -0.28
Srp9P49962 Gm37722-201ENSMUST00000193757 208 ntBASIC13.3□□□□□ -0.28
Srp9P49962 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.3□□□□□ -0.28
Srp9P49962 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Srp9P49962 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.3□□□□□ -0.28
Srp9P49962 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Srp9P49962 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Srp9P49962 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Srp9P49962 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Srp9P49962 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.3□□□□□ -0.28
Srp9P49962 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Srp9P49962 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Srp9P49962 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Srp9P49962 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Srp9P49962 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Srp9P49962 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Srp9P49962 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Srp9P49962 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Srp9P49962 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Srp9P49962 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Srp9P49962 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Srp9P49962 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Srp9P49962 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srp9P49962 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srp9P49962 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srp9P49962 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Srp9P49962 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srp9P49962 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Srp9P49962 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Srp9P49962 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.29□□□□□ -0.28
Srp9P49962 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Srp9P49962 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.29□□□□□ -0.28
Srp9P49962 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srp9P49962 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srp9P49962 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srp9P49962 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Srp9P49962 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.29□□□□□ -0.28
Srp9P49962 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.29□□□□□ -0.28
Srp9P49962 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
Srp9P49962 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Srp9P49962 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Srp9P49962 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Srp9P49962 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srp9P49962 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srp9P49962 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Srp9P49962 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srp9P49962 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Srp9P49962 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srp9P49962 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Srp9P49962 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srp9P49962 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.29□□□□□ -0.28
Srp9P49962 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srp9P49962 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Srp9P49962 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srp9P49962 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srp9P49962 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srp9P49962 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srp9P49962 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Srp9P49962 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Srp9P49962 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srp9P49962 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Srp9P49962 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Srp9P49962 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Srp9P49962 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.28□□□□□ -0.28
Srp9P49962 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Srp9P49962 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Srp9P49962 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Srp9P49962 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms