Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Atoh1P48985 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atoh1P48985 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atoh1P48985 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Atoh1P48985 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Atoh1P48985 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Atoh1P48985 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atoh1P48985 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atoh1P48985 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.57■□□□□ 0.4
Atoh1P48985 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atoh1P48985 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atoh1P48985 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Atoh1P48985 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.57■□□□□ 0.4
Atoh1P48985 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atoh1P48985 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Atoh1P48985 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Atoh1P48985 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Atoh1P48985 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atoh1P48985 Hist1h2al-201ENSMUST00000091708 339 ntBASIC17.57■□□□□ 0.4
Atoh1P48985 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atoh1P48985 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atoh1P48985 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Atoh1P48985 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atoh1P48985 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atoh1P48985 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atoh1P48985 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atoh1P48985 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atoh1P48985 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Atoh1P48985 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Atoh1P48985 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Atoh1P48985 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Atoh1P48985 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Atoh1P48985 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Atoh1P48985 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atoh1P48985 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.56■□□□□ 0.4
Atoh1P48985 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC17.56■□□□□ 0.4
Atoh1P48985 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.56■□□□□ 0.4
Atoh1P48985 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.56■□□□□ 0.4
Atoh1P48985 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atoh1P48985 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atoh1P48985 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atoh1P48985 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.56■□□□□ 0.4
Atoh1P48985 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Atoh1P48985 Gm13517-201ENSMUST00000120782 1495 ntBASIC17.56■□□□□ 0.4
Atoh1P48985 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atoh1P48985 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atoh1P48985 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atoh1P48985 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.55■□□□□ 0.4
Atoh1P48985 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atoh1P48985 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Atoh1P48985 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Atoh1P48985 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atoh1P48985 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Atoh1P48985 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC17.55■□□□□ 0.4
Atoh1P48985 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Atoh1P48985 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Atoh1P48985 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Atoh1P48985 Gm43767-201ENSMUST00000198933 381 ntBASIC17.55■□□□□ 0.4
Atoh1P48985 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atoh1P48985 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.55■□□□□ 0.4
Atoh1P48985 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atoh1P48985 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Atoh1P48985 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atoh1P48985 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Atoh1P48985 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atoh1P48985 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.55■□□□□ 0.4
Atoh1P48985 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atoh1P48985 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Atoh1P48985 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Atoh1P48985 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.54■□□□□ 0.4
Atoh1P48985 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atoh1P48985 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.54■□□□□ 0.4
Atoh1P48985 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atoh1P48985 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atoh1P48985 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atoh1P48985 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Atoh1P48985 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Atoh1P48985 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atoh1P48985 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atoh1P48985 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Atoh1P48985 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atoh1P48985 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atoh1P48985 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Atoh1P48985 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Atoh1P48985 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Atoh1P48985 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC17.54■□□□□ 0.4
Atoh1P48985 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.54■□□□□ 0.4
Atoh1P48985 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Atoh1P48985 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Atoh1P48985 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Atoh1P48985 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Atoh1P48985 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atoh1P48985 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atoh1P48985 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atoh1P48985 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atoh1P48985 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atoh1P48985 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atoh1P48985 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atoh1P48985 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Atoh1P48985 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms